RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CCT7Q99832 543 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 ROGDIQ9GZN7 287 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 SPNS1Q9H2V7 528 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 APMAPQ9HDC9 416 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 CUTCQ9NTM9 273 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 THAP1Q9NVV9 213 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 AHSPQ9NZD4 102 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 ZNF490Q9ULM2 529 aaPredicted RBP19.15■□□□□ 0.66
USP53-203ENST00000507597 WASF3Q9UPY6 502 aa19.15■□□□□ 0.66
USP53-203ENST00000507597 COL27A1Q8IZC6 1860 aaPredicted RBP19.15■□□□□ 0.66
USP53-203ENST00000507597 STMND1H3BQB6 276 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 KLF11O14901 512 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 AZIN1O14977 448 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 PRAMEF4O60810 478 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 FGF4P08620 206 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 CD63P08962 238 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 CD22P20273 847 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 ALAS2P22557 587 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 AVPR1BP47901 424 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 ARFIP1P53367 373 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 MAP7Q14244 749 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 PRAMEF9Q5VWM5 478 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 PWWP2BQ6NUJ5 590 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 VN1R4Q7Z5H5 301 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 GBP7Q8N8V2 638 aaPredicted RBP19.14■□□□□ 0.65
USP53-203ENST00000507597 OR6Y1Q8NGX8 325 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 FAM76AQ8TAV0 307 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 ZNF473Q8WTR7 871 aaKnown RBP19.14■□□□□ 0.65
USP53-203ENST00000507597 SERPINI1Q99574 410 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 BRF2Q9HAW0 419 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 NDOR1Q9UHB4 597 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 RUVBL1Q9Y265 456 aaKnown RBP19.14■□□□□ 0.65
USP53-203ENST00000507597 SLC22A7Q9Y694 548 aa19.14■□□□□ 0.65
USP53-203ENST00000507597 PTPRBP23467 1997 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 CDRT15L2A8MXV6 281 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 C9orf172C9J069 976 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 DSCR3O14972 297 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 NRP2O60462 931 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 STK17BO94768 372 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 KIAA0754O94854 1291 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 SLC5A2P31639 672 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 CYP4F2P78329 520 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 DDX39BQ13838 428 aaKnown RBP19.13■□□□□ 0.65
USP53-203ENST00000507597 TRIM40Q6P9F5 258 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 MARCH9Q86YJ5 346 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 ESX1Q8N693 406 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 HUS1BQ8NHY5 278 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 WDR20Q8TBZ3 569 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 GAL3ST3Q96A11 431 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 FAM117AQ9C073 453 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 REXO4Q9GZR2 422 aaKnown RBP19.13■□□□□ 0.65
USP53-203ENST00000507597 CLK4Q9HAZ1 481 aaKnown RBP19.13■□□□□ 0.65
USP53-203ENST00000507597 ANKHQ9HCJ1 492 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 ACSS2Q9NR19 701 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 RAP2CQ9Y3L5 183 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 TRAF6Q9Y4K3 522 aa19.13■□□□□ 0.65
USP53-203ENST00000507597 TMEM184BQ9Y519 407 aaPredicted RBP19.13■□□□□ 0.65
USP53-203ENST00000507597 A0A1B0GX78 115 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 A0A1W2PNU3 283 aaPredicted RBP19.12■□□□□ 0.65
USP53-203ENST00000507597 PPP6CO00743 305 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 FFAR3O14843 346 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 GPR42O15529 346 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 HCRTR1O43613 425 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 BRINP1O60477 761 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 SPINK2P20155 84 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 ATP1A2P50993 1020 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 RAP1GDS1P52306 607 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 ABHD18Q0P651 414 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 CSTF3Q12996 717 aaKnown RBP19.12■□□□□ 0.65
USP53-203ENST00000507597 SH2D4BQ5SQS7 431 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 TMEM214Q6NUQ4 689 aaKnown RBP19.12■□□□□ 0.65
USP53-203ENST00000507597 C6orf15Q6UXA7 325 aaPredicted RBP19.12■□□□□ 0.65
USP53-203ENST00000507597 TTLL10Q6ZVT0 673 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 CREB3L4Q8TEY5 395 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 ZNF75CPQ92670 426 aaPredicted RBP19.12■□□□□ 0.65
USP53-203ENST00000507597 MOCOSQ96EN8 888 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 MTERF1Q99551 399 aaKnown RBP19.12■□□□□ 0.65
USP53-203ENST00000507597 SLC6A16Q9GZN6 736 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 DMRT3Q9NQL9 472 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 ACSL6Q9UKU0 697 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 PADI1Q9ULC6 663 aa19.12■□□□□ 0.65
USP53-203ENST00000507597 SERTM1A2A2V5 107 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 LRIT2A6NDA9 550 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 SLCO1B7G3V0H7 640 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 H3BMH7 237 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 MANBAO00462 879 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 NTRK1P04629 796 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 ALOX12P18054 663 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 TSFMP43897 325 aaKnown RBP19.11■□□□□ 0.65
USP53-203ENST00000507597 HK2P52789 917 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 DCDP81605 110 aaKnown RBP19.11■□□□□ 0.65
USP53-203ENST00000507597 BST1Q10588 318 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 CUL3Q13618 768 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 IMPG1Q17R60 797 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 HKDC1Q2TB90 917 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 TOR1AIP1Q5JTV8 583 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 DEPDC1Q5TB30 811 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 OR2L5Q8NG80 312 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 RGMAQ96B86 450 aa19.11■□□□□ 0.65
USP53-203ENST00000507597 MTFMTQ96DP5 389 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms