RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ZNF486Q96H40 463 aaPredicted RBP3□□□□□ -1.93
LSM6-205ENST00000507449 PDLIM5Q96HC4 596 aaKnown RBP3□□□□□ -1.93
LSM6-205ENST00000507449 GMPPAQ96IJ6 420 aaPredicted RBP3□□□□□ -1.93
LSM6-205ENST00000507449 CABS1Q96KC9 395 aa3□□□□□ -1.93
LSM6-205ENST00000507449 VPS33BQ9H267 617 aa3□□□□□ -1.93
LSM6-205ENST00000507449 GPR173Q9NS66 373 aa3□□□□□ -1.93
LSM6-205ENST00000507449 PANK4Q9NVE7 773 aa3□□□□□ -1.93
LSM6-205ENST00000507449 ATAD3AQ9NVI7 634 aa3□□□□□ -1.93
LSM6-205ENST00000507449 MTRRQ9UBK8 725 aa3□□□□□ -1.93
LSM6-205ENST00000507449 FBXL4Q9UKA2 621 aa3□□□□□ -1.93
LSM6-205ENST00000507449 ELF5Q9UKW6 265 aaPredicted RBP3□□□□□ -1.93
LSM6-205ENST00000507449 WDR37Q9Y2I8 494 aa3□□□□□ -1.93
LSM6-205ENST00000507449 SMCHD1A6NHR9 2005 aa3□□□□□ -1.93
LSM6-205ENST00000507449 SPATA31D1Q6ZQQ2 1576 aa3□□□□□ -1.93
LSM6-205ENST00000507449 NEDD4P46934 1319 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 A0A087X0K7 114 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 A0A1W2PRV1 198 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 MEIOCA2RUB1 952 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 NR5A2O00482 541 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 PGRMC2O15173 223 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 ECE2O60344 883 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 IGKV3-20P01619 116 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 ATP6V1B1P15313 513 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 RPL35AP18077 110 aaKnown RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 VCLP18206 1134 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 ELAVL4P26378 380 aaKnown RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 CASP3P42574 277 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 CRIP2P52943 208 aaPredicted RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 XGP55808 180 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 FKBP1BP68106 108 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 AKAP17AQ02040 695 aaKnown RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 GUCY2DQ02846 1103 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 ACTN3Q08043 901 aaPredicted RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 PPP2R5CQ13362 524 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 MTF1Q14872 753 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 CCDC6Q16204 474 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 DUSP5Q16690 384 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 TMEM30BQ3MIR4 351 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 AARDQ4LEZ3 155 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 FCRLAQ7L513 359 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 ASPGQ86U10 573 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 HOGA1Q86XE5 327 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 CATSPERDQ86XM0 798 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 C10orf53Q8N6V4 93 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 SMYD1Q8NB12 490 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 DDHD1Q8NEL9 900 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 UBLCP1Q8WVY7 318 aaPredicted RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 FBXO17Q96EF6 278 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 NKX3-1Q99801 234 aaPredicted RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 OSBPL8Q9BZF1 889 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 SLC5A7Q9GZV3 580 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 FAM49AQ9H0Q0 323 aaPredicted RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 WDR13Q9H1Z4 485 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 P2RY12Q9H244 342 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 SCRT2Q9NQ03 307 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 PLCXD1Q9NUJ7 323 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 INTS10Q9NVR2 710 aaKnown RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 TMEM161AQ9NX61 479 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 HACD3Q9P035 362 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 CACNG5Q9UF02 275 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 MRPS28Q9Y2Q9 187 aaKnown RBP2.99□□□□□ -1.93
LSM6-205ENST00000507449 TMED7Q9Y3B3 224 aa2.99□□□□□ -1.93
LSM6-205ENST00000507449 A0A087WZ39 114 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 C5orf51A6NDU8 294 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 C15orf61A6NNL5 157 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 SRRM4A7MD48 611 aaKnown RBP2.98□□□□□ -1.93
LSM6-205ENST00000507449 A8MVM7 634 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 SLCO1B7G3V0H7 640 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 SCO2O43819 266 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 CYTIPO60759 359 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 RTN2O75298 545 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 ZNF821O75541 412 aaPredicted RBP2.98□□□□□ -1.93
LSM6-205ENST00000507449 MT-ND2P03891 347 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 KRT3P12035 628 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 OPRL1P41146 370 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 HNF4AP41235 474 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 PAX9P55771 341 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 BTG1P62324 171 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 RPP38P78345 283 aaKnown RBP2.98□□□□□ -1.93
LSM6-205ENST00000507449 ABRQ12979 859 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 ITGA9Q13797 1035 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 TMEM187Q14656 261 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 EFTUD2Q15029 972 aaKnown RBP eCLIP2.98□□□□□ -1.93
LSM6-205ENST00000507449 SGCBQ16585 318 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 HFEQ30201 348 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 AGAP6Q5VW22 663 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 LSMEM2Q8N112 164 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 TCEANCQ8N8B7 351 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 RFT1Q96AA3 541 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 AP2M1Q96CW1 435 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 CDKN2AIPNLQ96HQ2 116 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 C17orf62Q9BQA9 187 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 RBM4Q9BWF3 364 aaKnown RBP2.98□□□□□ -1.93
LSM6-205ENST00000507449 TDRD1Q9BXT4 1180 aaKnown RBP2.98□□□□□ -1.93
LSM6-205ENST00000507449 PITPNM3Q9BZ71 974 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 RNPEPL1Q9HAU8 725 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 FGF22Q9HCT0 170 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 SPG21Q9NZD8 308 aa2.98□□□□□ -1.93
LSM6-205ENST00000507449 SLC12A6Q9UHW9 1150 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms