RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PHEXP78562 749 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 ZNF33BQ06732 778 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 CSTF3Q12996 717 aaKnown RBP13.53□□□□□ -0.24
RNF4-208ENST00000507247 HKDC1Q2TB90 917 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 SLC9B1Q4ZJI4 515 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 C10orf62Q5T681 223 aaPredicted RBP13.53□□□□□ -0.24
RNF4-208ENST00000507247 KCT2Q8NC54 265 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 TRPV3Q8NET8 790 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 OR1L3Q8NH93 324 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 SLC13A3Q8WWT9 602 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 RERGQ96A58 199 aaPredicted RBP13.53□□□□□ -0.24
RNF4-208ENST00000507247 ZNF501Q96CX3 271 aaPredicted RBP13.53□□□□□ -0.24
RNF4-208ENST00000507247 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 TRIM55Q9BYV6 548 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 OR51B5Q9H339 312 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 KLHL31Q9H511 634 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 BRF2Q9HAW0 419 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 STARD5Q9NSY2 213 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 GIMAP2Q9UG22 337 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 DCTN4Q9UJW0 460 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 PPT2Q9UMR5 302 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 SLC12A4Q9UP95 1085 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 CACNA1AO00555 2505 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 LRIT2A6NDA9 550 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 TRPC5OSA6NMA1 111 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 EFCAB7A8K855 629 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 SLC28A1O00337 649 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 SRPX2O60687 465 aaPredicted RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 SERPINA6P08185 405 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
RNF4-208ENST00000507247 CSTF2P33240 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
RNF4-208ENST00000507247 AQP5P55064 265 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 TUBB3Q13509 450 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 PWP1Q13610 501 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 PRTGQ2VWP7 1150 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 TOR1AIP1Q5JTV8 583 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 WASHC2DQ5SRD0 308 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 EPGNQ6UW88 154 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 ARHGEF39Q8N4T4 335 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 CSNK1A1LQ8N752 337 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 BMPERQ8N8U9 685 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 CAMKVQ8NCB2 501 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 AGBL5Q8NDL9 886 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 CMTM7Q96FZ5 175 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 MAELQ96JY0 434 aaKnown RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 DEPDC7Q96QD5 511 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 F2RL3Q96RI0 385 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 RTKNQ9BST9 563 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 SLC6A16Q9GZN6 736 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 SPRTNQ9H040 489 aaPredicted RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 NSRP1Q9H0G5 558 aaKnown RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 WDR55Q9H6Y2 383 aaPredicted RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 PRM3Q9NNZ6 103 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 FGF21Q9NSA1 209 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 PSD3Q9NYI0 1048 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 CLCA2Q9UQC9 943 aa13.52□□□□□ -0.25
RNF4-208ENST00000507247 RUVBL1Q9Y265 456 aaKnown RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 MRPS2Q9Y399 296 aaKnown RBP13.52□□□□□ -0.25
RNF4-208ENST00000507247 PMS2P1A4D2B8 440 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 SAP18O00422 153 aaKnown RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 LSM1O15116 133 aaKnown RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 DIAPH2O60879 1101 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 RSL1D1O76021 490 aaKnown RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 MED26O95402 600 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 SLC35G6P0C7Q6 338 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 CCL4P13236 92 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 EPHA3P29320 983 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 IDH3AP50213 366 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 ACY1Q03154 408 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 RGS1Q08116 209 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 NR6A1Q15406 480 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 IMPG1Q17R60 797 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 ADPRMQ3LIE5 342 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 DEPDC1Q5TB30 811 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 KHDRBS2Q5VWX1 349 aaKnown RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 UBE3DQ7Z6J8 389 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 CPLX4Q7Z7G2 160 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 GBP7Q8N8V2 638 aaPredicted RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 C10orf82Q8WW14 230 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 N4BP2L2Q92802 583 aaPredicted RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 MS4A6EQ96DS6 147 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 APIPQ96GX9 242 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 LIN37Q96GY3 246 aaPredicted RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 OR6C1Q96RD1 312 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 OR52B2Q96RD2 323 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 SERPINI1Q99574 410 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 CCT7Q99832 543 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 ELAC2Q9BQ52 826 aaKnown RBP13.51□□□□□ -0.25
RNF4-208ENST00000507247 TMEM120AQ9BXJ8 343 aa13.51□□□□□ -0.25
RNF4-208ENST00000507247 MRPL1Q9BYD6 325 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms