RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 P2RX6O15547 441 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CCP110O43303 1012 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 OR6B1O95007 311 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 RCBTB2O95199 551 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 FGFR1OPO95684 399 aaKnown RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PPP1R3DO95685 299 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 MBD3O95983 291 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CGAP01215 116 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 TPM2P07951 284 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PNMA6AP0CW24 399 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CYP11B1P15538 503 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PKLRP30613 574 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 TLX1P31314 330 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 SDC4P31431 198 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 IL2RGP31785 369 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CPOXP36551 454 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 SRP14P37108 136 aaKnown RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 SLC6A12P48065 614 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PRLHRP49683 370 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 AGTR2P50052 363 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 GPR143P51810 404 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 NUDT6P53370 316 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LOXL3P58215 753 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 ARF3P61204 181 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 UBE2HP62256 183 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 UBA52P62987 128 aaKnown RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 NOMO3P69849 1222 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 MPP1Q00013 466 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LRRC63Q05C16 580 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CETN1Q12798 172 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 FAPQ12884 760 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PTP4A2Q12974 167 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PNOCQ13519 176 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 KRT33BQ14525 404 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 NRF1Q16656 503 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 TPD52L1Q16890 204 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 HKDC1Q2TB90 917 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CCDC40Q4G0X9 1142 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LDLRAP1Q5SW96 308 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 FAM182AQ5T1J6 154 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 SAMD5Q5TGI4 173 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LRRC8BQ6P9F7 803 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 SUSD1Q6UWL2 747 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 GK5Q6ZS86 529 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 C1orf229Q6ZS94 237 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 RFX8Q6ZV50 586 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PRSS41Q7RTY9 318 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 ATG4DQ86TL0 474 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CAND1Q86VP6 1230 aaKnown RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 HOOK3Q86VS8 718 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 GPSM1Q86YR5 675 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LRRC25Q8N386 305 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 SNX31Q8N9S9 440 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 HM13Q8TCT9 377 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 MRAPQ8TCY5 172 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 METTL21AQ8WXB1 218 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 FAM168AQ92567 244 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 MAML1Q92585 1016 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 TFGQ92734 400 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 HTRA1Q92743 480 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CAVIN3Q969G5 261 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 FBXW5Q969U6 566 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 GTPBP3Q969Y2 492 aaKnown RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 STARD4Q96DR4 205 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 MMABQ96EY8 250 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 WDYHV1Q96HA8 205 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 BTBD9Q96Q07 612 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 GSDMAQ96QA5 445 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PEBP4Q96S96 227 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LPAR4Q99677 370 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 FAM173AQ9BQD7 235 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 C1QTNF5Q9BXJ0 243 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 XPO4Q9C0E2 1151 aaKnown RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PIGMQ9H3S5 423 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 GOLPH3LQ9H4A5 285 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LDAHQ9H6V9 325 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CALHM2Q9HA72 323 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 MAGEE1Q9HCI5 957 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 BPIFA1Q9NP55 256 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 UBE2TQ9NPD8 197 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 TIMMDC1Q9NPL8 285 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 LUC7LQ9NQ29 371 aaKnown RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CLCF1Q9UBD9 225 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 NKX1-2Q9UD57 310 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 C19orf25Q9UFG5 118 aaPredicted RBP3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PACSIN3Q9UKS6 424 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 CTNND2Q9UQB3 1225 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 HPSEQ9Y251 543 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 ATG4BQ9Y4P1 393 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PCDHA13Q9Y5I0 950 aa3.04□□□□□ -1.92
TCOF1-208ENST00000506063 PCNX3Q9H6A9 2034 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 FAM237AA0A1B0GTK4 181 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 A0A1W2PNV4 684 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 OR2A25A4D2G3 310 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RBMY1BA6NDE4 496 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RBMY1EA6NEQ0 496 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 POM121CA8CG34 1229 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 AGAP14A8MT82 685 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 MAGEB17A8MXT2 336 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TARM1B6A8C7 271 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms