RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CNR2P34972 360 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CA8P35219 290 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SFTPDP35247 375 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 USP8P40818 1118 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 TNFRSF4P43489 277 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ENTPD1P49961 510 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CCL11P51671 97 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LIMK2P53671 638 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 PRMT2P55345 433 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CLDN20P56880 219 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 INSM1Q01101 510 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 DMPKQ09013 629 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 FZD5Q13467 585 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 IL18Q14116 193 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 P2RY14Q15391 338 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 TATDN3Q17R31 274 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 HIST2H2AA3Q6FI13 130 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LCN10Q6JVE6 187 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZSCAN25Q6NSZ9 544 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM159AQ6UWV7 190 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF517Q6ZMY9 492 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CDHR3Q6ZTQ4 885 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 MON1BQ7L1V2 547 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 DGLUCYQ7Z3D6 616 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LIMS2Q7Z4I7 341 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 PATL1Q86TB9 770 aaKnown RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 TMEM151BQ8IW70 566 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF444Q8N0Y2 327 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC43A2Q8N370 569 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 PPFIBP2Q8ND30 876 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 BPIFCQ8NFQ6 507 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR9K2Q8NGE7 335 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR8K3Q8NH51 312 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR52I2Q8NH67 350 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM81AQ8TBF8 368 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CHPT1Q8WUD6 406 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SEPT8Q92599 483 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 NT5C3BQ969T7 300 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 WBP2Q969T9 261 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 NCLNQ969V3 563 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 EME1Q96AY2 570 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 DACT3Q96B18 629 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 DHX58Q96C10 678 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRRC39Q96DD0 335 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 HPDLQ96IR7 371 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 PLEKHG4BQ96PX9 1271 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC22A12Q96S37 553 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 KRT12Q99456 494 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 C11orf70Q9BRQ4 267 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CBWD1Q9BRT8 395 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 MSTO1Q9BUK6 570 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRMDAQ9H2I8 198 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 DPEP2Q9H4A9 486 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ACTL8Q9H568 366 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SYNDIG1Q9H7V2 258 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 C10orf88Q9H8K7 445 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 MED20Q9H944 212 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 FN3KRPQ9HA64 309 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 KCNK13Q9HB14 408 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LZTFL1Q9NQ48 299 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SPATA7Q9P0W8 599 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 PPP4R1LQ9P1A2 415 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LCMT1Q9UIC8 334 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ERVK-19Q9WJR5 959 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 MRPS2Q9Y399 296 aaKnown RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 KLK4Q9Y5K2 254 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 DUSP10Q9Y6W6 482 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 TNIKQ9UKE5 1360 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 CENPVL1A0A0U1RR11 272 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 C2CD4BA6NLJ0 364 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR52A4PA6NMU1 304 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TMEM178BH3BS89 294 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PDXKO00764 312 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 CETN3O15182 167 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 RNF13O43567 381 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 DFNA5O60443 496 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 CLN5O75503 358 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 JTBO76095 146 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ANP32DO95626 131 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 CHRM5P08912 532 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PNMTP11086 282 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 EGR2P11161 476 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC2A3P11169 496 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TSPAN8P19075 237 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 AXLP30530 894 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 BMI1P35226 326 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 RPL3P39023 403 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 RPL21P46778 160 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 KCNJ4P48050 445 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 COMPP49747 757 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 TNFSF10P50591 281 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PDX1P52945 283 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 GP2P55259 537 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 HNRNPH2P55795 449 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 EIF3EP60228 445 aaKnown RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 PDE1BQ01064 536 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 MAP2K1Q02750 393 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ACY1Q03154 408 aa3.41□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF415Q09FC8 603 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms