RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 C10orf90Q96M02 699 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 HBEGFQ99075 208 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 MTERF1Q99551 399 aaKnown RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 SARGQ9BW04 601 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC7A5P2Q9GIP4 190 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 C20orf27Q9GZN8 174 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 DRC3Q9H069 523 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 CUTCQ9NTM9 273 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 NDOR1Q9UHB4 597 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 PCDHGA3Q9Y5H0 932 aa12.64□□□□□ -0.39
PDLIM7-212ENST00000504380 SDK2Q58EX2 2172 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 IGF2RP11717 2491 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 SCN3AQ9NY46 2000 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 A0A0G2JN53 185 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 C4orf51C9J302 202 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 SAP18O00422 153 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 NVLO15381 856 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 NPHS1O60500 1241 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 UGDHO60701 494 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 ESRRBO95718 433 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 SERPINE1P05121 402 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 NR1D1P20393 614 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 HNRNPH1P31943 449 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 AHRP35869 848 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 GCGRP47871 477 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 PKNOX1P55347 436 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 RPS13P62277 151 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 GPS2Q13227 327 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 GRM7Q14831 915 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 HSP90B2PQ58FF3 399 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 CLEC6AQ6EIG7 209 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 TLDC1Q6P9B6 456 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 FAM199XQ6PEV8 388 aaPredicted RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 TTLL10Q6ZVT0 673 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 PRSS41Q7RTY9 318 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 CUZD1Q86UP6 607 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 BPHLQ86WA6 291 aaPredicted RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 ARHGEF39Q8N4T4 335 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 CAMKVQ8NCB2 501 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 HUS1BQ8NHY5 278 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 WDR20Q8TBZ3 569 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 METTL6Q8TCB7 284 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 NT5CQ8TCD5 201 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 ZNF473Q8WTR7 871 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 SREK1Q8WXA9 508 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 GATA6Q92908 595 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 NAF1Q96HR8 494 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 F2RL3Q96RI0 385 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 NDC1Q9BTX1 674 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 ASPSCR1Q9BZE9 553 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 SPRY4Q9C004 299 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 RHBGQ9H310 441 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 OR51B5Q9H339 312 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 TRPS1Q9UHF7 1281 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 PCDHGA11Q9Y5H2 935 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 MAU2Q9Y6X3 613 aa12.63□□□□□ -0.39
PDLIM7-212ENST00000504380 A0A0A6YYC8 382 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 MAGEB17A8MXT2 336 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 TMEM233B4DJY2 109 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 H0YIV9 168 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 I3L1I5 382 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 MANBAO00462 879 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 TLX3O43711 291 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 DNAJB6O75190 326 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 DXOO77932 396 aaKnown RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 ETHE1O95571 254 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 DLGAP3O95886 979 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 PDYNP01213 254 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 ZNF888P0CJ79 500 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 HMOX2P30519 316 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 OR1D4P47884 311 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 RAB8AP61006 207 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 ABCE1P61221 599 aaKnown RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 BST1Q10588 318 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 STX3Q13277 289 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 TGIF1Q15583 401 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 GGTA1PQ4G0N0 100 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 TMEM214Q6NUQ4 689 aaKnown RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 CYB5D1Q6P9G0 228 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 TRPV3Q8NET8 790 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 UBE2E3Q969T4 207 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 TEFMQ96QE5 360 aaKnown RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 ZPBPQ9BS86 351 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 NLNQ9BYT8 704 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 SLC6A16Q9GZN6 736 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 PITHD1Q9GZP4 211 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 DMRT3Q9NQL9 472 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 ZDHHC2Q9UIJ5 367 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 PCDHGA7Q9Y5G6 932 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 PTGDR2Q9Y5Y4 395 aa12.62□□□□□ -0.39
PDLIM7-212ENST00000504380 AKAP13Q12802 2813 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 ZNF860A6NHJ4 632 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 FOXS1O43638 330 aa12.61□□□□□ -0.39
PDLIM7-212ENST00000504380 CPNE3O75131 537 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms