RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 DLDP09622 509 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SPATA31C1P0DKV0 1188 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 UMPSP11172 480 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LAP3P28838 519 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TPMTP51580 245 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 METAP1P53582 386 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ATXN1P54253 815 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TSPAN5P62079 268 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NOMO3P69849 1222 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MPP1Q00013 466 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC6A3Q01959 620 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 IRF8Q02556 426 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PTSQ03393 145 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SEMA3BQ13214 749 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 UGCGQ16739 394 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZBED5Q49AG3 693 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR33Q49SQ1 333 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ARL13AQ5H913 290 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 OVOS1Q6IE37 1185 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SULT1C3Q6IMI6 304 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LAIR2Q6ISS4 152 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 JMJD6Q6NYC1 403 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GLT6D1Q7Z4J2 308 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PRRT2Q7Z6L0 340 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SLCO6A1Q86UG4 719 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RETREG3Q86VR2 466 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ANKRD46Q86W74 232 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SYT12Q8IV01 421 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC37A3Q8NCC5 494 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DUSP19Q8WTR2 217 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LRTOMTQ8WZ04 291 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PPP1R14AQ96A00 147 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ADAD1Q96M93 576 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CPNE1Q99829 537 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 EBNA1BP2Q99848 306 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM106CQ9BVX2 250 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MRPS30Q9NP92 439 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ITM2CQ9NQX7 267 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CTPS2Q9NRF8 586 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PLCXD1Q9NUJ7 323 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NDRG3Q9UGV2 375 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC25A13Q9UJS0 675 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC22A14Q9Y267 594 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SAMHD1Q9Y3Z3 626 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SF3B1O75533 1304 aaKnown RBP eCLIP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ANKDD1BA6NHY2 528 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 H3BQ06 376 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 KPNA3O00505 521 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CASC3O15234 703 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TSPAN2O60636 221 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ERAL1O75616 437 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SEC14L2O76054 403 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TM7SF2O76062 418 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 UBXN7O94888 489 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 LSM8O95777 96 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CLIC3O95833 236 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TRUB2O95900 331 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 FCGR1AP12314 374 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 IFI30P13284 250 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 COX7A2P14406 83 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 EPORP19235 508 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TYMPP19971 482 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PAICSP22234 425 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 EIF2DP41214 584 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PREPP48147 710 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 NDUFV1P49821 464 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB13P51153 203 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB39AQ14964 217 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ZBTB6Q15916 424 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MICBQ29980 383 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC35G1Q2M3R5 365 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SOWAHCQ53LP3 525 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PYDC2Q56P42 97 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DCAF12L1Q5VU92 463 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RAP1GAP2Q684P5 730 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PGBD2Q6P3X8 592 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MBOAT1Q6ZNC8 495 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RNF44Q7L0R7 432 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CHST15Q7LFX5 561 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC22A16Q86VW1 577 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TDRPQ86YL5 185 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ARMC8Q8IUR7 673 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR65Q8IYL9 337 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GHDCQ8N2G8 530 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PYROXD2Q8N2H3 581 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MEIOBQ8N635 442 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TTC29Q8NA56 475 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 OR56A4Q8NGH8 313 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SPATA22Q8NHS9 363 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MCFD2Q8NI22 146 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF420Q8TAQ5 688 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TFAP2BQ92481 460 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MYO18AQ92614 2054 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TOP1MTQ969P6 601 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 NXNL1Q96CM4 212 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MOCOSQ96EN8 888 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 P2RY11Q96G91 374 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM169Q96HH4 297 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF597Q96LX8 424 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms