RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TXNDC9O14530 226 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 CASKO14936 926 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 SUSD5O60279 629 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 PHF2O75151 1096 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 ITGA10O75578 1167 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 GLSO94925 669 aaPredicted RBP11.62□□□□□ -0.55
LSM6-204ENST00000504181 CEACAM8P31997 349 aaPredicted RBP11.62□□□□□ -0.55
LSM6-204ENST00000504181 CCR7P32248 378 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 UBXN1Q04323 297 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 TRIM14Q14142 442 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 NDUFAF5Q5TEU4 345 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 TTC23LQ6PF05 361 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 RFX6Q8HWS3 928 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 RAB42Q8N4Z0 105 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 MCOLN3Q8TDD5 553 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 TFB1MQ8WVM0 346 aaKnown RBP11.62□□□□□ -0.55
LSM6-204ENST00000504181 RAD51AP1Q96B01 352 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 PEX11GQ96HA9 241 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 MAK16Q9BXY0 300 aaKnown RBP11.62□□□□□ -0.55
LSM6-204ENST00000504181 LRTM1Q9HBL6 345 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 RSPH14Q9UHP6 348 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 TRGV5A0A0B4J1U4 118 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 IGKV1-8A0A0C4DH67 115 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 A8MV72 311 aaPredicted RBP11.61□□□□□ -0.55
LSM6-204ENST00000504181 RDH16O75452 317 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 SOX30O94993 753 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 BCL6P41182 706 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 GEMP55040 296 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 MPP1Q00013 466 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 WIPI1Q5MNZ9 446 aaPredicted RBP11.61□□□□□ -0.55
LSM6-204ENST00000504181 CDKAL1Q5VV42 579 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 E4F1Q66K89 784 aaPredicted RBP11.61□□□□□ -0.55
LSM6-204ENST00000504181 BHLHB9Q6PI77 547 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 SUSD1Q6UWL2 747 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 PACS1Q6VY07 963 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 PLD3Q8IV08 490 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 ARMC10Q8N2F6 343 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 MEIOBQ8N635 442 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 HMGCLL1Q8TB92 370 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 LKAAEAR1Q8TD35 194 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 GORASP1Q9BQQ3 440 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 LANCL2Q9NS86 450 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 SPTLC3Q9NUV7 552 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 SAE1Q9UBE0 346 aaPredicted RBP11.61□□□□□ -0.55
LSM6-204ENST00000504181 NFS1Q9Y697 457 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 MGAM2Q2M2H8 2515 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 MED12Q93074 2177 aa11.61□□□□□ -0.55
LSM6-204ENST00000504181 TRBV11-1A0A0K0K1C0 115 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 SAGE2PA6NJ88 616 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 A8MUA0 341 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 LGALS16A8MUM7 142 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 A8MVJ9 347 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 HAT1O14929 419 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 SIAH2O43255 324 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 IL2RAP01589 272 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 SSR4P51571 173 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 MSLNQ13421 630 aaPredicted RBP11.6□□□□□ -0.55
LSM6-204ENST00000504181 TSTA3Q13630 321 aaPredicted RBP11.6□□□□□ -0.55
LSM6-204ENST00000504181 VEZF1Q14119 521 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 ITIH4Q14624 930 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 SLC10A1Q14973 349 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 IL20RBQ6UXL0 311 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 RANBP10Q6VN20 620 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 GK5Q6ZS86 529 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 PCGF5Q86SE9 256 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 FBXW8Q8N3Y1 598 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 ZCCHC10Q8TBK6 192 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 ENOX1Q8TC92 643 aaKnown RBP11.6□□□□□ -0.55
LSM6-204ENST00000504181 ROBO4Q8WZ75 1007 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 ISL2Q96A47 359 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 HS3ST6Q96QI5 342 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 ERGIC2Q96RQ1 377 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 MACROD1Q9BQ69 325 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 IL1RL2Q9HB29 575 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 HPF1Q9NWY4 346 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 CDC42EP3Q9UKI2 254 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 FBXW2Q9UKT8 454 aa11.6□□□□□ -0.55
LSM6-204ENST00000504181 RUVBL2Q9Y230 463 aaKnown RBP11.6□□□□□ -0.55
LSM6-204ENST00000504181 OR51F1A6NGY5 319 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 ZNF860A6NHJ4 632 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 C3orf70A6NLC5 250 aaPredicted RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 H7C0S8 307 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 OR1I1O60431 355 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 GPC4O75487 556 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 C1orf105O95561 183 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 CYP1A2P05177 515 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 SKILP12757 684 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 PKMP14618 531 aaKnown RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 EZRP15311 586 aaKnown RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 ZFXP17010 805 aaPredicted RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 ADRA1AP35348 466 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 HYAL2Q12891 473 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 SIX1Q15475 284 aaPredicted RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 ACSF3Q4G176 576 aaPredicted RBP11.59□□□□□ -0.55
LSM6-204ENST00000504181 ZNF425Q6IV72 752 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 C20orf204Q6ZNR8 217 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 KIAA0408Q6ZU52 694 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 ABHD13Q7L211 337 aa11.59□□□□□ -0.55
LSM6-204ENST00000504181 ADCK2Q7Z695 626 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms