RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CYTH2Q99418 400 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 TEKT2Q9UIF3 430 aa20.84■□□□□ 0.93
LSM6-203ENST00000503982 ERRFI1Q9UJM3 462 aaPredicted RBP20.84■□□□□ 0.93
LSM6-203ENST00000503982 UTP11Q9Y3A2 253 aaKnown RBP20.84■□□□□ 0.93
LSM6-203ENST00000503982 TRAV17A0A0B4J275 112 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 FAM95CA0A1B0GW59 222 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 NPEPPSL1A6NEC2 478 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 CDC123O75794 336 aaPredicted RBP20.83■□□□□ 0.93
LSM6-203ENST00000503982 RNF224P0DH78 156 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 SOX11P35716 441 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 SLC12A2P55011 1212 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 ACTN3Q08043 901 aaPredicted RBP20.83■□□□□ 0.93
LSM6-203ENST00000503982 RGS1Q08116 209 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 C8orf74Q6P047 294 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 ZBED8Q8IZ13 594 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 NKAPQ8N5F7 415 aaKnown RBP20.83■□□□□ 0.93
LSM6-203ENST00000503982 BCORP1Q8N888 145 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 OR56A3Q8NH54 315 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 FAR1Q8WVX9 515 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 SLC5A11Q8WWX8 675 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 TM4SF19Q96DZ7 209 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 WDR83Q9BRX9 315 aaKnown RBP20.83■□□□□ 0.93
LSM6-203ENST00000503982 PLAC1Q9HBJ0 212 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 OLAHQ9NV23 265 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 GRHL1Q9NZI5 618 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 OSGIN2Q9Y236 505 aa20.83■□□□□ 0.93
LSM6-203ENST00000503982 OR2W5A6NFC9 320 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 E7ESA3 106 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 MYBL2P10244 700 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 SKP1P63208 163 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 MRPS25P82663 173 aaKnown RBP20.82■□□□□ 0.92
LSM6-203ENST00000503982 CAV1Q03135 178 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 ZNF460Q14592 562 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 FASTKD3Q14CZ7 662 aaKnown RBP20.82■□□□□ 0.92
LSM6-203ENST00000503982 HERC3Q15034 1050 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 RBBP5Q15291 538 aaKnown RBP20.82■□□□□ 0.92
LSM6-203ENST00000503982 CATSPEREQ5SY80 951 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 PSMF1Q92530 271 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 VPS39Q96JC1 886 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 DPH5Q9H2P9 285 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 NSMCE4AQ9NXX6 385 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 PSAT1Q9Y617 370 aa20.82■□□□□ 0.92
LSM6-203ENST00000503982 TRBC2A0A5B9 178 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 CDC7O00311 574 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 WDPCPO95876 746 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 EDN3P14138 238 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 ZNF37AP17032 561 aaPredicted RBP20.81■□□□□ 0.92
LSM6-203ENST00000503982 AGTR2P50052 363 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 EFNA3P52797 238 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 CALCOCO2Q13137 446 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 ANKRD37Q7Z713 158 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 TMPRSS11BQ86T26 416 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 PDSS2Q86YH6 399 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 AMER2Q8N7J2 671 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 ABHD11Q8NFV4 315 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 HAS2Q92819 552 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 NEIL2Q969S2 332 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 OR4K3Q96R72 315 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 KCNK13Q9HB14 408 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 PRM3Q9NNZ6 103 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 STMN3Q9NZ72 180 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 TXNDC16Q9P2K2 825 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 CTNNAL1Q9UBT7 734 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 IKZF3Q9UKT9 509 aa20.81■□□□□ 0.92
LSM6-203ENST00000503982 A0A1W2PQ72 361 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 ZNF888P0CJ79 500 aaPredicted RBP20.8■□□□□ 0.92
LSM6-203ENST00000503982 HNF4AP41235 474 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 TNFSF10P50591 281 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 OLR1P78380 273 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 FRG1Q14331 258 aaKnown RBP20.8■□□□□ 0.92
LSM6-203ENST00000503982 RPUSD3Q6P087 351 aaKnown RBP20.8■□□□□ 0.92
LSM6-203ENST00000503982 TMEM207Q6UWW9 146 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 ABHD13Q7L211 337 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 THOC6Q86W42 341 aaKnown RBP20.8■□□□□ 0.92
LSM6-203ENST00000503982 ZC3HC1Q86WB0 502 aaKnown RBP20.8■□□□□ 0.92
LSM6-203ENST00000503982 SHISA5Q8N114 240 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 NOA1Q8NC60 698 aaKnown RBP20.8■□□□□ 0.92
LSM6-203ENST00000503982 ZNF740Q8NDX6 193 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 OR5T3Q8NGG3 340 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 PYROXD1Q8WU10 500 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 MOCOSQ96EN8 888 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 AIF1LQ9BQI0 150 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 LRRC1Q9BTT6 524 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 GPAMQ9HCL2 828 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 ABI3Q9P2A4 366 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 SLC22A7Q9Y694 548 aa20.8■□□□□ 0.92
LSM6-203ENST00000503982 URADA6NGE7 173 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 EIF3HO15372 352 aaKnown RBP eCLIP20.79■□□□□ 0.92
LSM6-203ENST00000503982 LDLRP01130 860 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 CYC1P08574 325 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 ALOX12P18054 663 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 PWP1Q13610 501 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 ABRAXAS2Q15018 415 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 NSDHLQ15738 373 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 DEFB134Q4QY38 66 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 SFT2D3Q587I9 215 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 FCRLBQ6BAA4 426 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 SBSNQ6UWP8 590 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 CDKL2Q92772 493 aa20.79■□□□□ 0.92
LSM6-203ENST00000503982 PDLIM5Q96HC4 596 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms