RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 IDI2Q9BXS1 227 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 ZMYND12Q9H0C1 365 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 UBQLN3Q9H347 655 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 RIMS4Q9H426 269 aaPredicted RBP4.44□□□□□ -1.7
SCLT1-206ENST00000503565 APOBEC3GQ9HC16 384 aaKnown RBP4.44□□□□□ -1.7
SCLT1-206ENST00000503565 FAM118AQ9NWS6 357 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 ELOVL5Q9NYP7 299 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 TBK1Q9UHD2 729 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 UBQLN2Q9UHD9 624 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 TSPAN16Q9UKR8 245 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 DNPEPQ9ULA0 475 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 CCPG1Q9ULG6 757 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 AURKCQ9UQB9 309 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 NUDCQ9Y266 331 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 VDAC3Q9Y277 283 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 AP1M2Q9Y6Q5 423 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 LRRC7Q96NW7 1537 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 CGNL1Q0VF96 1302 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 FAM205AQ6ZU69 1335 aa4.44□□□□□ -1.7
SCLT1-206ENST00000503565 PLEKHG1Q9ULL1 1385 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 TMEM129A0AVI4 362 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 MAGEB16A2A368 324 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ASPDHA6ND91 283 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 CFAP73A6NFT4 308 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 VGLL3A8MV65 326 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 SLC28A2O43868 658 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 F3P13726 295 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 CD59P13987 128 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 GOT1P17174 413 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 PEX5P50542 639 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 CNN1P51911 297 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 FUT6P51993 359 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 SLC26A5P58743 744 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 GMFBP60983 142 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 FKBP1BP68106 108 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 SLC34A1Q06495 639 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 KRTAP1-1Q07627 177 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 KLC1Q07866 573 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ZBTB17Q13105 803 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 GK2Q14410 553 aaPredicted RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 KARSQ15046 597 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 INAQ16352 499 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 HLFQ16534 295 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 PHKG1Q16816 387 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ZNF260Q3ZCT1 412 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 TAF1BQ53T94 588 aaPredicted RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 XKR3Q5GH77 459 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ZNF425Q6IV72 752 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 RBM43Q6ZSC3 357 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 MARK2Q7KZI7 788 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 MCM10Q7L590 875 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 RTN4RL2Q86UN3 420 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 DCP1BQ8IZD4 617 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 PELI3Q8N2H9 469 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 KLHDC1Q8N7A1 406 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 CCDC63Q8NA47 563 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 NOA1Q8NC60 698 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 IPMKQ8NFU5 416 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 OR1J1Q8NGS3 322 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 SLC26A7Q8TE54 656 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 SYAP1Q96A49 352 aaPredicted RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 SLCO4A1Q96BD0 722 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ZNF385AQ96PM9 386 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 PRMT1Q99873 361 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 NYXQ9GZU5 481 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 NAPBQ9H115 298 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 TMEM245Q9H330 911 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 YY1AP1Q9H869 796 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 TCF7L2Q9NQB0 619 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ZCCHC3Q9NUD5 404 aaKnown RBP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 SLC38A7Q9NVC3 462 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 DONSONQ9NYP3 566 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCLT1-206ENST00000503565 RNF7Q9UBF6 113 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 KCNN3Q9UGI6 736 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ZDHHC2Q9UIJ5 367 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 STUB1Q9UNE7 303 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 PLEKHA6Q9Y2H5 1048 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 ZFYVE9O95405 1425 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 FAM135BQ49AJ0 1406 aa4.43□□□□□ -1.7
SCLT1-206ENST00000503565 NPIPA3F8WFD2 350 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 H3BNX3 289 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 RASGRF2O14827 1237 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 PRDM1O75626 825 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 PAPSS2O95340 614 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-206ENST00000503565 CHRNA3P32297 505 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 GLIPR1P48060 266 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 HNRNPFP52597 415 aaKnown RBP4.42□□□□□ -1.7
SCLT1-206ENST00000503565 KCNJ10P78508 379 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 MAP2K1Q02750 393 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-206ENST00000503565 TSTA3Q13630 321 aaPredicted RBP4.42□□□□□ -1.7
SCLT1-206ENST00000503565 CEBPEQ15744 281 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 ACKR1Q16570 336 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 PRAMEF7Q5VXH5 474 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 DLEU7Q6UYE1 221 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 B3GLCTQ6Y288 498 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 SPATA31E1Q6ZUB1 1445 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 CDK20Q8IZL9 346 aa4.42□□□□□ -1.7
SCLT1-206ENST00000503565 MUC20Q8N307 709 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms