RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 HAS2Q92819 552 aa15.34■□□□□ 0.05
SCLT1-204ENST00000503215 PEX11GQ96HA9 241 aa15.34■□□□□ 0.05
SCLT1-204ENST00000503215 PDLIM5Q96HC4 596 aaKnown RBP15.34■□□□□ 0.05
SCLT1-204ENST00000503215 UNKQ9C0B0 810 aaKnown RBP15.34■□□□□ 0.05
SCLT1-204ENST00000503215 LANCL2Q9NS86 450 aa15.34■□□□□ 0.05
SCLT1-204ENST00000503215 CORO1CQ9ULV4 474 aaPredicted RBP15.34■□□□□ 0.05
SCLT1-204ENST00000503215 SLC5A6Q9Y289 635 aa15.34■□□□□ 0.05
SCLT1-204ENST00000503215 DIDO1Q9BTC0 2240 aaKnown RBP15.34■□□□□ 0.05
SCLT1-204ENST00000503215 SCN2AQ99250 2005 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 FAM95CA0A1B0GW59 222 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 TRBC2A0A5B9 178 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 DYTNA2CJ06 578 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 A8MUI8 341 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 CXorf49A8MYA2 514 aaPredicted RBP15.33■□□□□ 0.04
SCLT1-204ENST00000503215 E7ESA3 106 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 NDUFS4O43181 175 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 MAN1A2O60476 641 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 WISP2O76076 250 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 ZNF37AP17032 561 aaPredicted RBP15.33■□□□□ 0.04
SCLT1-204ENST00000503215 GRK3P35626 688 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 ELOAQ14241 798 aaKnown RBP15.33■□□□□ 0.04
SCLT1-204ENST00000503215 DEFB134Q4QY38 66 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 RIPOR1Q6ZS17 1223 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 METTL21AQ8WXB1 218 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 TSLPQ969D9 159 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 MAGEB10Q96LZ2 347 aaPredicted RBP15.33■□□□□ 0.04
SCLT1-204ENST00000503215 RUNDC3BQ96NL0 473 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 MCMBPQ9BTE3 642 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 TUBB6Q9BUF5 446 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 SARGQ9BW04 601 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 TRIM54Q9BYV2 358 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 KLHL31Q9H511 634 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 ZFATQ9P243 1243 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 OSGIN2Q9Y236 505 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 SLC22A7Q9Y694 548 aa15.33■□□□□ 0.04
SCLT1-204ENST00000503215 UNC79Q9P2D8 2635 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 CCDC188H7C350 402 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 DDAH2O95865 285 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 HNF4AP41235 474 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 SCTRP47872 440 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 RHAGQ02094 409 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 CSHL1Q14406 222 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 BTBD16Q32M84 506 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 ZNF324BQ6AW86 544 aaPredicted RBP15.32■□□□□ 0.04
SCLT1-204ENST00000503215 THOC6Q86W42 341 aaKnown RBP15.32■□□□□ 0.04
SCLT1-204ENST00000503215 ZBED8Q8IZ13 594 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 C17orf53Q8N3J3 647 aaPredicted RBP15.32■□□□□ 0.04
SCLT1-204ENST00000503215 SPATA6LQ8N4H0 392 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 ANKRD53Q8N9V6 530 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 SLC5A11Q8WWX8 675 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 NPAS2Q99743 824 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 SLX1AQ9BQ83 275 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 AICDAQ9GZX7 198 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCLT1-204ENST00000503215 DPH5Q9H2P9 285 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 STMN3Q9NZ72 180 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 SLC22A14Q9Y267 594 aa15.32■□□□□ 0.04
SCLT1-204ENST00000503215 C4orf51C9J302 202 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 PCDH17O14917 1159 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 CHST10O43529 356 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 GALR3O60755 368 aaPredicted RBP15.31■□□□□ 0.04
SCLT1-204ENST00000503215 ENO2P09104 434 aaPredicted RBP15.31■□□□□ 0.04
SCLT1-204ENST00000503215 SLC35G6P0C7Q6 338 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 ZNF888P0CJ79 500 aaPredicted RBP15.31■□□□□ 0.04
SCLT1-204ENST00000503215 SSTR1P30872 391 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 GMPRP36959 345 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 GDF5P43026 501 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 PAFAH1B1P43034 410 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 KCNK10P57789 538 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 ZNF33BQ06732 778 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 HYAL2Q12891 473 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 ABRAXAS2Q15018 415 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 TSNQ15631 228 aaKnown RBP15.31■□□□□ 0.04
SCLT1-204ENST00000503215 SFT2D3Q587I9 215 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 PLAG1Q6DJT9 500 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 RPUSD3Q6P087 351 aaKnown RBP15.31■□□□□ 0.04
SCLT1-204ENST00000503215 NXPE4Q6UWF7 544 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 FAM180AQ6UWF9 173 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 UTP15Q8TED0 518 aaKnown RBP15.31■□□□□ 0.04
SCLT1-204ENST00000503215 ATL1Q8WXF7 558 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 C5orf34Q96MH7 638 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 CAB39LQ9H9S4 337 aa15.31■□□□□ 0.04
SCLT1-204ENST00000503215 MTO1Q9Y2Z2 717 aaKnown RBP15.31■□□□□ 0.04
SCLT1-204ENST00000503215 TRAV17A0A0B4J275 112 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 PABPN1LA6NDY0 278 aaKnown RBP15.3■□□□□ 0.04
SCLT1-204ENST00000503215 LRRTM2O43300 516 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 WISP3O95389 354 aaPredicted RBP15.3■□□□□ 0.04
SCLT1-204ENST00000503215 UQCRHP07919 91 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 ICAM2P13598 275 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 EDN3P14138 238 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 ALOX12P18054 663 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 MST1P26927 711 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 RAB8AP61006 207 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 REEP5Q00765 189 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 PWP1Q13610 501 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 HERC3Q15034 1050 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 NSDHLQ15738 373 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 ABHD17BQ5VST6 288 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 ZNF787Q6DD87 383 aa15.3■□□□□ 0.04
SCLT1-204ENST00000503215 TMPRSS11BQ86T26 416 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms