RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 BANF1O75531 89 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 CDC123O75794 336 aaPredicted RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 TTC4O95801 387 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 AGTR2P50052 363 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 CCR8P51685 355 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 IL2P60568 153 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 PMP22Q01453 160 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 MEF2AQ02078 507 aaPredicted RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 OC90Q02509 493 aaPredicted RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 CRYMQ14894 314 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 NSDHLQ15738 373 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 CYP1B1Q16678 543 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 MEP1AQ16819 746 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 BBS9Q3SYG4 887 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 SPANXN3Q5MJ09 141 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 ACER2Q5QJU3 275 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 RBM20Q5T481 1227 aaKnown RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 ZNF324BQ6AW86 544 aaPredicted RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 PLAG1Q6DJT9 500 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 TMEM214Q6NUQ4 689 aaKnown RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 ANKRD37Q7Z713 158 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 AGGF1Q8N302 714 aaeCLIP10.12□□□□□ -0.79
SNCA-207ENST00000502987 ARHGEF39Q8N4T4 335 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 GPATCH11Q8N954 259 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 C2CD4AQ8NCU7 369 aaPredicted RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 PYCR2Q96C36 320 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 CFAP36Q96G28 342 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 PEX11GQ96HA9 241 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 UTP23Q9BRU9 249 aaKnown RBP10.12□□□□□ -0.79
SNCA-207ENST00000502987 HAUS8Q9BT25 410 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 RBCK1Q9BYM8 510 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 FAM129AQ9BZQ8 928 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 RNF32Q9H0A6 362 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 ANKRD10Q9NXR5 420 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 SH2B3Q9UQQ2 575 aa10.12□□□□□ -0.79
SNCA-207ENST00000502987 NDUFS4O43181 175 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 MLYCDO95822 493 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 GUCA1CO95843 209 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 AHSGP02765 367 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 ESRRAP11474 423 aaPredicted RBP10.11□□□□□ -0.79
SNCA-207ENST00000502987 NPPBP16860 134 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 SAT1P21673 171 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 MST1P26927 711 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 MAGEA3P43357 314 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 FNTAP49354 379 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 TDGF1P3P51864 188 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 EFNA3P52797 238 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 CDKN2DP55273 166 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 OR4D2P58180 307 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 TAS2R50P59544 299 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 SNRPNP63162 240 aaKnown RBP10.11□□□□□ -0.79
SNCA-207ENST00000502987 SKP1P63208 163 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 DHX9Q08211 1270 aaKnown RBP10.11□□□□□ -0.79
SNCA-207ENST00000502987 SP140Q13342 867 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 CSHL1Q14406 222 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 ABRAXAS2Q15018 415 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 HERC3Q15034 1050 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 EXT1Q16394 746 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 SFT2D3Q587I9 215 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 HP1BP3Q5SSJ5 553 aaPredicted RBP10.11□□□□□ -0.79
SNCA-207ENST00000502987 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 DUPD1Q68J44 220 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 PAPD4Q6PIY7 484 aaKnown RBP10.11□□□□□ -0.79
SNCA-207ENST00000502987 LCTLQ6UWM7 567 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 PCGF5Q86SE9 256 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 BEST3Q8N1M1 668 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 SLC35F6Q8N357 371 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 MFSD9Q8NBP5 474 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 M1APQ8TC57 530 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 RELTQ969Z4 430 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 TM4SF19Q96DZ7 209 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 SNF8Q96H20 258 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 OSBPL9Q96SU4 736 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 LPAR4Q99677 370 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 NAT9Q9BTE0 207 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 ENTPD4Q9Y227 616 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 NEU2Q9Y3R4 380 aa10.11□□□□□ -0.79
SNCA-207ENST00000502987 DNALI1O14645 258 aaPredicted RBP10.1□□□□□ -0.79
SNCA-207ENST00000502987 NDC80O14777 642 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 B4GALT2O60909 372 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 CYC1P08574 325 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 IL10P22301 178 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 EEF1DP29692 281 aaKnown RBP10.1□□□□□ -0.79
SNCA-207ENST00000502987 CD96P40200 585 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 HNF4AP41235 474 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 OLR1P78380 273 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 TIAL1Q01085 375 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNCA-207ENST00000502987 ALDH6A1Q02252 535 aaKnown RBP10.1□□□□□ -0.79
SNCA-207ENST00000502987 RGS1Q08116 209 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 TUBA3CQ13748 450 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
SNCA-207ENST00000502987 PHKG1Q16816 387 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.1□□□□□ -0.79
SNCA-207ENST00000502987 DEFB134Q4QY38 66 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 RNASEH2BQ5TBB1 312 aaKnown RBP10.1□□□□□ -0.79
SNCA-207ENST00000502987 MTFR2Q6P444 385 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 TUBA3EQ6PEY2 450 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 MRGPRGQ86SM5 289 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 PDSS2Q86YH6 399 aa10.1□□□□□ -0.79
SNCA-207ENST00000502987 CRLF3Q8IUI8 442 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms