RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 FEZF1A0PJY2 475 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 MAGEB17A8MXT2 336 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 CDK2AP1O14519 115 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 SLC16A5O15375 505 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 LCMT2O60294 686 aaKnown RBP11.33□□□□□ -0.6
CNOT4-211ENST00000498534 TBPL1P62380 186 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 NAE1Q13564 534 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 ABRAXAS2Q15018 415 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 HERC3Q15034 1050 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 C3AR1Q16581 482 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
CNOT4-211ENST00000498534 HSP90AA5PQ58FG0 334 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 ANKRD22Q5VYY1 191 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 NIPAL1Q6NVV3 410 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 PAPD4Q6PIY7 484 aaKnown RBP11.33□□□□□ -0.6
CNOT4-211ENST00000498534 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 GAS2L3Q86XJ1 694 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 SPPL2CQ8IUH8 684 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 MYO1HQ8N1T3 1032 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 KCT2Q8NC54 265 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 MDS2Q8NDY4 140 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 ZCCHC10Q8TBK6 192 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 EEF1AKMT1Q8WVE0 214 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 PEX11GQ96HA9 241 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 GPR137Q96N19 417 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 SERPINB12Q96P63 405 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 SIGLEC12Q96PQ1 595 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 OR1F2PQ96R84 312 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 HAUS8Q9BT25 410 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 FAM167BQ9BTA0 163 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 AARSD1Q9BTE6 412 aaKnown RBP11.33□□□□□ -0.6
CNOT4-211ENST00000498534 TRIM54Q9BYV2 358 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 ATG10Q9H0Y0 220 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 ANKRD10Q9NXR5 420 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 TAS2R13Q9NYV9 303 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 PDE10AQ9Y233 779 aa11.33□□□□□ -0.6
CNOT4-211ENST00000498534 NPIPA5E9PKD4 350 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 NDC80O14777 642 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 ASNA1O43681 348 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 OR1F1O43749 312 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 RDH16O75452 317 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 SP1P08047 785 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 F7P08709 466 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-211ENST00000498534 NPPBP16860 134 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 JAK1P23458 1154 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 COILP38432 576 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-211ENST00000498534 CCR8P51685 355 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 OR4D2P58180 307 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 MEF2AQ02078 507 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-211ENST00000498534 MAPKAPK3Q16644 382 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 SLC25A25Q6KCM7 469 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 LCTLQ6UWM7 567 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 RPS19BP1Q86WX3 136 aaKnown RBP11.32□□□□□ -0.6
CNOT4-211ENST00000498534 LGI4Q8N135 537 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 MFSD9Q8NBP5 474 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
CNOT4-211ENST00000498534 ADAMTS18Q8TE60 1221 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 TBC1D20Q96BZ9 403 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 SCMH1Q96GD3 660 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 CDCP1Q9H5V8 836 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 IARS2Q9NSE4 1012 aaKnown RBP11.32□□□□□ -0.6
CNOT4-211ENST00000498534 LRFN1Q9P244 771 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 TINAGQ9UJW2 476 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 ADAMTS6Q9UKP5 1117 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 NPIPA1Q9UND3 350 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
CNOT4-211ENST00000498534 PDZD2O15018 2839 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 ASPDHA6ND91 283 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 GABRR3A8MPY1 467 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 CDC123O75794 336 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 WISP2O76076 250 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 CLDN14O95500 239 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 SERPIND1P05546 499 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 FHP07954 510 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 CDH1P12830 882 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 ABOP16442 354 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 POU3F2P20265 443 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 SNRPNP63162 240 aaKnown RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 MPP1Q00013 466 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 RHAGQ02094 409 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 SP140Q13342 867 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 PWP1Q13610 501 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 USP10Q14694 798 aaKnown RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 DUPD1Q68J44 220 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 TTC27Q6P3X3 843 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 CCDC137Q6PK04 289 aaKnown RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 Q6ZPB1 254 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 GALNTL5Q7Z4T8 443 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 PDSS2Q86YH6 399 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 EID3Q8N140 333 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 TMEM125Q96AQ2 219 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 MTFMTQ96DP5 389 aaKnown RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 SNF8Q96H20 258 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 SIGLEC10Q96LC7 697 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 LURAP1Q96LR2 239 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 NAP1L3Q99457 506 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-211ENST00000498534 SGPP1Q9BX95 441 aa11.31□□□□□ -0.6
CNOT4-211ENST00000498534 HES7Q9BYE0 225 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms