RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IQCMA0A1B0GVH7 501 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 NKX6-3A6NJ46 265 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 UBE2CO00762 179 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 YES1P07947 543 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 CD59P13987 128 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 UBASH3AP57075 661 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 OR1D5P58170 312 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 RFTN1Q14699 578 aaPredicted RBP2.79□□□□□ -1.96
SMC4-227ENST00000497984 NONOQ15233 471 aaKnown RBP eCLIP2.79□□□□□ -1.962e-56■■■■■ 142.8
SMC4-227ENST00000497984 RBBP7Q16576 425 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 REG3GQ6UW15 175 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 ENPP7Q6UWV6 458 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 ZC3H3Q8IXZ2 948 aaKnown RBP2.79□□□□□ -1.96
SMC4-227ENST00000497984 RHOXF1Q8NHV9 184 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 EXT2Q93063 718 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 PGM2Q96G03 612 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 TXLNGYQ9BZA5 131 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 FN3KQ9H479 309 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 RAVER2Q9HCJ3 691 aaKnown RBP2.79□□□□□ -1.96
SMC4-227ENST00000497984 XAB2Q9HCS7 855 aaKnown RBP2.79□□□□□ -1.96
SMC4-227ENST00000497984 ANKEF1Q9NU02 776 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 NKIRAS2Q9NYR9 191 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 FBXL4Q9UKA2 621 aa2.79□□□□□ -1.96
SMC4-227ENST00000497984 NPHP3Q7Z494 1330 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 A0A1W2PQ72 361 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 MTMR11A4FU01 709 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 A8MXE2 369 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 RNF103O00237 685 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 CYTIPO60759 359 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 LUC7L3O95232 432 aaKnown RBP2.78□□□□□ -1.96
SMC4-227ENST00000497984 ERCC2P18074 760 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 EPORP19235 508 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 EDNRAP25101 427 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 SFTPDP35247 375 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 ERVK-16P61578 105 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 DHODHQ02127 395 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 ATP1A1-AS1Q5TC04 95 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 MFSD4BQ5TF39 518 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 SLC30A6Q6NXT4 461 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 TMEM64Q6YI46 380 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 CHST3Q7LGC8 479 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 CPEB2Q7Z5Q1 589 aaKnown RBP2.78□□□□□ -1.96
SMC4-227ENST00000497984 GBP7Q8N8V2 638 aaPredicted RBP2.78□□□□□ -1.96
SMC4-227ENST00000497984 P2RX5Q93086 422 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 SPATA33Q96N06 139 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 DNAI2Q9GZS0 605 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 FZD8Q9H461 694 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 RABEP2Q9H5N1 569 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 PKD2L2Q9NZM6 624 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 HACD3Q9P035 362 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 WDR35Q9P2L0 1181 aa2.78□□□□□ -1.96
SMC4-227ENST00000497984 C17orf105B2RV13 164 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 P4HA2O15460 535 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 TLX2O43763 284 aaPredicted RBP2.77□□□□□ -1.97
SMC4-227ENST00000497984 MTRF1O75570 445 aaKnown RBP2.77□□□□□ -1.97
SMC4-227ENST00000497984 PRDM1O75626 825 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 ZNF19P17023 458 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 ACAT1P24752 427 aaKnown RBP2.77□□□□□ -1.97
SMC4-227ENST00000497984 HSPA4P34932 840 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 KHKP50053 298 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 ZNF146Q15072 292 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 LACTB2Q53H82 288 aaPredicted RBP2.77□□□□□ -1.97
SMC4-227ENST00000497984 SUSD4Q5VX71 490 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 C16orf54Q6UWD8 224 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 ANKRD33Q7Z3H0 272 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 AMIGO1Q86WK6 493 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 OR4N5Q8IXE1 308 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 SLC22A15Q8IZD6 547 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 LRTM2Q8N967 370 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 CAMKVQ8NCB2 501 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 OR4C15Q8NGM1 316 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 SLC26A7Q8TE54 656 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 CASP10Q92851 521 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 B3GALT6Q96L58 329 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 LURAP1Q96LR2 239 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 JPT2Q9H910 190 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 EXOC1Q9NV70 894 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 ZNF581Q9P0T4 197 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 POLLQ9UGP5 575 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 PILRBQ9UKJ0 227 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 PLCL2Q9UPR0 1127 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 CCL27Q9Y4X3 112 aa2.77□□□□□ -1.97
SMC4-227ENST00000497984 RNF123Q5XPI4 1314 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 A0A087WZ39 114 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 IGHV3-20A0A0C4DH32 117 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 IGHV3-38A0A0C4DH36 116 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 TRIM49BA6NDI0 452 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 HMGB1P1B2RPK0 211 aaPredicted RBP2.76□□□□□ -1.97
SMC4-227ENST00000497984 F8VVB4 439 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 F8VWA3 439 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 CCL24O00175 119 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 RECQL5O94762 991 aaPredicted RBP2.76□□□□□ -1.97
SMC4-227ENST00000497984 GGPS1O95749 300 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 SERPING1P05155 500 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 CCDC175P0C221 793 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 F3P13726 295 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 SELEP16581 610 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 ATP4BP51164 291 aa2.76□□□□□ -1.97
SMC4-227ENST00000497984 MFAP3P55082 362 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms