RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MFRPQ9BY79 579 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 SLAMF7Q9NQ25 335 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 IKZF3Q9UKT9 509 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 DYRK1BQ9Y463 629 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 OARD1Q9Y530 152 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 PCSK5Q92824 1860 aa14.55□□□□□ -0.08
NUP50-219ENST00000497960 UQCRHLA0A096LP55 91 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 IDSB3KWA1 339 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 H0YIG0 161 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 FFAR3O14843 346 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 GPR42O15529 346 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 NSA2O95478 260 aaKnown RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 HEXBP07686 556 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 UQCRHP07919 91 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 SLC35G6P0C7Q6 338 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 CD1DP15813 335 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 CDKL1Q00532 357 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 RASA2Q15283 850 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 TSNQ15631 228 aaKnown RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 PPP1R3AQ16821 1122 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 ZXDCQ2QGD7 858 aaPredicted RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 TMEM214Q6NUQ4 689 aaKnown RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 JMJD6Q6NYC1 403 aaPredicted RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 KLC3Q6P597 504 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 LAPTM4BQ86VI4 370 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 ATCAYQ86WG3 371 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 RBMXL3Q8N7X1 1067 aaKnown RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 OR9A4Q8NGU2 314 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 SLC5A11Q8WWX8 675 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 EXT2Q93063 718 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 PNPLA2Q96AD5 504 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 OR4K3Q96R72 315 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 MACROD1Q9BQ69 325 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 ROPN1BQ9BZX4 212 aaPredicted RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 TGIF2Q9GZN2 237 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 ZNF552Q9H707 407 aaPredicted RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 ROPN1Q9HAT0 212 aaPredicted RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 ANKHQ9HCJ1 492 aa14.54□□□□□ -0.08
NUP50-219ENST00000497960 MRPS2Q9Y399 296 aaKnown RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 FLNBO75369 2602 aaKnown RBP14.54□□□□□ -0.08
NUP50-219ENST00000497960 BSNQ9UPA5 3926 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 TRBC2A0A5B9 178 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 PCDH17O14917 1159 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 OR1F1O43749 312 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 LCMT2O60294 686 aaKnown RBP14.53□□□□□ -0.08
NUP50-219ENST00000497960 ALOX12BO75342 701 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 HPP00738 406 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 TFEBP19484 476 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 HNMTP50135 292 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 MAT1AQ00266 395 aaKnown RBP14.53□□□□□ -0.08
NUP50-219ENST00000497960 MEF2AQ02078 507 aaPredicted RBP14.53□□□□□ -0.08
NUP50-219ENST00000497960 SYT16Q17RD7 645 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 FAM83EQ2M2I3 478 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 AGAP7PQ5VUJ5 663 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 THOC6Q86W42 341 aaKnown RBP14.53□□□□□ -0.08
NUP50-219ENST00000497960 PARP9Q8IXQ6 854 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 CENPLQ8N0S6 344 aaPredicted RBP14.53□□□□□ -0.08
NUP50-219ENST00000497960 ZADH2Q8N4Q0 377 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 OR4K1Q8NGD4 311 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 ZCCHC10Q8TBK6 192 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 CPT1CQ8TCG5 803 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 NEIL2Q969S2 332 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 MIB2Q96AX9 1013 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 NXNL1Q96CM4 212 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 TM4SF19Q96DZ7 209 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 AGAP4Q96P64 663 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 ZIM3Q96PE6 472 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 SARGQ9BW04 601 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 ALG9Q9H6U8 611 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 NMRAL1Q9HBL8 299 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 RNF112Q9ULX5 631 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 KCNE2Q9Y6J6 123 aa14.53□□□□□ -0.08
NUP50-219ENST00000497960 NSG1A0A0A6YYJ2 146 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 GOLGA8RI6L899 631 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 SORBS2O94875 1100 aaKnown RBP14.52□□□□□ -0.09
NUP50-219ENST00000497960 KLHL2O95198 593 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 IL1RNP18510 177 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 VARSP26640 1264 aaKnown RBP14.52□□□□□ -0.09
NUP50-219ENST00000497960 GLRBP48167 497 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 ZNF844Q08AG5 666 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 DLG1Q12959 904 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 TSNAXIP1Q2TAA8 658 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 CATSPEREQ5SY80 951 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 CEP85LQ5SZL2 805 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 ATG9BQ674R7 924 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 SLC6A19Q695T7 634 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 IGFL3Q6UXB1 125 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 LRIG3Q6UXM1 1119 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 TIFABQ6ZNK6 161 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 NDUFAF7Q7L592 441 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 ZC3H7AQ8IWR0 971 aaKnown RBP14.52□□□□□ -0.09
NUP50-219ENST00000497960 KCT2Q8NC54 265 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 MZB1Q8WU39 189 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 C8orf44Q96CB5 159 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 SCYL1Q96KG9 808 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 UBXN10Q96LJ8 280 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 AIF1LQ9BQI0 150 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 LHPPQ9H008 270 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 PELI2Q9HAT8 420 aa14.52□□□□□ -0.09
NUP50-219ENST00000497960 ZNF160Q9HCG1 818 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms