RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CYLC1P35663 651 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GJC1P36383 396 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NAMPTP43490 491 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CAPZBP47756 277 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NPY4RP50391 375 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CD69Q07108 199 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SCN1BQ07699 218 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TEFQ10587 303 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RIN1Q13671 783 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MEP1BQ16820 701 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MPPE1Q53F39 396 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 C3orf38Q5JPI3 329 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 HACD4Q5VWC8 232 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 WSCD1Q658N2 575 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SEL1L3Q68CR1 1132 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 KRT80Q6KB66 452 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC25A25Q6KCM7 469 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RFWD3Q6PCD5 774 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PRSS57Q6UWY2 283 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CERS6Q6ZMG9 384 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 AACSQ86V21 672 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 XYLT1Q86Y38 959 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 EID3Q8N140 333 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GHDCQ8N2G8 530 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 METTL4Q8N3J2 472 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GUF1Q8N442 669 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SYT14Q8NB59 555 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC197Q8NCU1 140 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 OR5T2Q8NGG2 359 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SCAMP5Q8TAC9 235 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MAGEE2Q8TD90 523 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 AENQ8WTP8 325 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GLMPQ8WWB7 406 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RLN3Q8WXF3 142 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SNX19Q92543 992 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PHYHIPQ92561 330 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 KAT2AQ92830 837 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 APBB2Q92870 758 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GLG1Q92896 1179 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC7A6OSQ96CW6 309 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NEIL1Q96FI4 390 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SAMD8Q96LT4 415 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF385AQ96PM9 386 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PNKPQ96T60 521 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 KRT12Q99456 494 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CITED1Q99966 193 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MAPKAP1Q9BPZ7 522 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 C2orf88Q9BSF0 95 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 HTATIP2Q9BUP3 242 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TRAF4Q9BUZ4 470 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PLA2G12BQ9BX93 195 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RAB17Q9H0T7 212 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 FOXP1Q9H334 677 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ABHD16BQ9H3Z7 469 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 FBXO44Q9H4M3 255 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PDZD7Q9H5P4 517 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TLR8Q9NR97 1041 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CTPS2Q9NRF8 586 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CHRAC1Q9NRG0 131 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ABCB10Q9NRK6 738 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TREX1Q9NSU2 369 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 IMPAD1Q9NX62 359 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SMPD4Q9NXE4 827 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PLK2Q9NYY3 685 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CNIH4Q9P003 139 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 EIF3KQ9UBQ5 218 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PEF1Q9UBV8 284 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 GLS2Q9UI32 602 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 HAO1Q9UJM8 370 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 AMFRQ9UKV5 643 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 DNPEPQ9ULA0 475 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ACSL5Q9ULC5 683 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NFU1Q9UMS0 254 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SORCS3Q9UPU3 1222 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 STRAPQ9Y3F4 350 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NUBP2Q9Y5Y2 271 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 LYVE1Q9Y5Y7 322 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SHROOM2Q13796 1616 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PFASO15067 1338 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 POLR3AO14802 1390 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NID2Q14112 1375 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SPATA31E1Q6ZUB1 1445 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TEX14Q8IWB6 1497 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 TRBC2A0A5B9 178 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 C2orf78A6NCI8 922 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ANKDD1BA6NHY2 528 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 E9PAM4 449 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 NPIPA7E9PJI5 369 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 M0QZ92 97 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC16A3O15427 465 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CUTAO60888 179 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CTNSO60931 367 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF623O75123 536 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 PRKRAO75569 313 aaKnown RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 RECQL5O94762 991 aaPredicted RBP2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTL6BO94805 426 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 ZWINTO95229 277 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 LYPLA2O95372 231 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 CH25HO95992 272 aa2.99□□□□□ -1.93
SNRNP48-202ENST00000496946 MT-ATP6P00846 226 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms