RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	STMND1	H3BQB6	276 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	CLGN	O14967	610 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	OR1F1	O43749	312 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	ONECUT2	O95948	504 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	MYZAP	P0CAP1	466 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	MYL2	P10916	166 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	TAC1	P20366	129 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	AHR	P35869	848 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	EMP3	P54852	163 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	CDH13	P55290	713 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	DNAJB13	P59910	316 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	IRF8	Q02556	426 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	HYAL2	Q12891	473 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	TRAF3	Q13114	568 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	MAP7	Q14244	749 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	SLBP	Q14493	270 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
APTX-233	ENST00000496030	GRM7	Q14831	915 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	PCLAF	Q15004	111 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	FAM219B	Q5XKK7	198 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	ADNP2	Q6IQ32	1131 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	RHBDD2	Q6NTF9	364 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	TMIGD1	Q6UXZ0	262 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	GPR135	Q8IZ08	494 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	CSNK1A1L	Q8N752	337 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	L3MBTL4	Q8NA19	623 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	ARMC2	Q8NEN0	867 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	OR52B6	Q8NGF0	335 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	CREB3L4	Q8TEY5	395 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	PTCD3	Q96EY7	689 aa	Known RBP	11.33	□□□□□ -0.6
APTX-233	ENST00000496030	C10orf90	Q96M02	699 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	GBP5	Q96PP8	586 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	PSMG3-AS1	Q96PY0	264 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	FAM111A	Q96PZ2	611 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	ARHGAP9	Q9BRR9	750 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	NOL11	Q9H8H0	719 aa	Known RBP	11.33	□□□□□ -0.6
APTX-233	ENST00000496030	VIPAS39	Q9H9C1	493 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.33	□□□□□ -0.6
APTX-233	ENST00000496030	SLC22A11	Q9NSA0	550 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	WDR70	Q9NW82	654 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	OXSM	Q9NWU1	459 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	ZFP69B	Q9UJL9	534 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	ZNF225	Q9UK10	706 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	RUVBL1	Q9Y265	456 aa	Known RBP	11.33	□□□□□ -0.6
APTX-233	ENST00000496030	MAN2B2	Q9Y2E5	1009 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	RNF11	Q9Y3C5	154 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	SCN3A	Q9NY46	2000 aa		11.33	□□□□□ -0.6
APTX-233	ENST00000496030	LRBA	P50851	2863 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	CCDC88C	Q9P219	2028 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	UQCRHL	A0A096LP55	91 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	MEN1	O00255	615 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	FOXS1	O43638	330 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	RAD1	O60671	282 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	CPNE3	O75131	537 aa	Known RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	H2AFY	O75367	372 aa	Known RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	EIF2S1	P05198	315 aa	Known RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	CAPN1	P07384	714 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	UQCRH	P07919	91 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	DHRS4L1	P0CG22	281 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	LIPC	P11150	499 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	TSPAN8	P19075	237 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	GRK3	P35626	688 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	ASPG	Q86U10	573 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	SLC22A9	Q8IVM8	553 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	C10orf107	Q8IVU9	208 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	LAS2	Q8IYD9	372 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	DSEL	Q8IZU8	1212 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	KCT2	Q8NC54	265 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	OR6Y1	Q8NGX8	325 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	NT5C	Q8TCD5	201 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	SLC13A3	Q8WWT9	602 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	N4BP2L2	Q92802	583 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	SH3GL2	Q99962	352 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	EFCAB11	Q9BUY7	163 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	NTMT1	Q9BV86	223 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	RHBG	Q9H310	441 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	GSTO2	Q9H4Y5	243 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	CUTC	Q9NTM9	273 aa		11.32	□□□□□ -0.6
APTX-233	ENST00000496030	DHCR7	Q9UBM7	475 aa	Known RBP	11.32	□□□□□ -0.6
APTX-233	ENST00000496030	LOC101059948	A0A1B0GTJ6	334 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	UBFD1	O14562	309 aa	Known RBP	11.31	□□□□□ -0.6
APTX-233	ENST00000496030	DSCR3	O14972	297 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	PRPF4	O43172	522 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
APTX-233	ENST00000496030	SUPT7L	O94864	414 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	HBQ1	P09105	142 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	SMIM10L1	P0DMW3	83 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	F8A1	P23610	371 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	CXCR2	P25025	360 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	ALDH3A1	P30838	453 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	STAT5A	P42229	794 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	CCR10	P46092	362 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	PIK3CG	P48736	1102 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	NAGLU	P54802	743 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	CLC	Q05315	142 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	LAPTM5	Q13571	262 aa		11.31	□□□□□ -0.6
APTX-233	ENST00000496030	PWP1	Q13610	501 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms