RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 LINC00615Q96LM1 132 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 FCRL4Q96PJ5 515 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TRAPPC9Q96Q05 1148 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TRIM4Q9C037 500 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 AMBRA1Q9C0C7 1298 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF696Q9H7X3 374 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TPT1P8Q9HAU6 139 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 SLAMF7Q9NQ25 335 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF451Q9Y4E5 1061 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 H3BNH8 94 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 QSOX1O00391 747 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ERN1O75460 977 aaKnown RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CEACAM5P06731 702 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 AK4P27144 223 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TIA1P31483 386 aaKnown RBP eCLIP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ARSFP54793 590 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ATAT1Q5SQI0 421 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 PRAMEF14Q5SWL7 426 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 PRAMEF13Q5VWM6 474 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 METRNLQ641Q3 311 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF765Q7L2R6 523 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 GPR155Q7Z3F1 870 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 LRRTM4Q86VH4 590 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 FLCNQ8NFG4 579 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CSGALNACT1Q8TDX6 532 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 C12orf66Q96MD2 445 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CCDC115Q96NT0 180 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF717Q9BY31 904 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 Q9H521 79 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 WDR26Q9H7D7 661 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 C2orf42Q9NWW7 574 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 RUVBL1Q9Y265 456 aaKnown RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 DENND4AQ7Z401 1863 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3DA0A087WVF3 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3IA0A087WXS9 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3EA0A087X179 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3KA0A087X1G2 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 C1orf226A1L170 272 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3FA6NER0 549 aaPredicted RBP9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3LB9A6J9 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 NPIPB8E9PQR5 432 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 PLPP1O14494 284 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 UGDHO60701 494 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TNFAIP8O95379 198 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 ALPLP05186 524 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 IL3P08700 152 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3HP0C7X1 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 IL7RP16871 459 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 NDUFV2P19404 249 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 CLCN2P51788 898 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 MVDP53602 400 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 FOXK1P85037 733 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 ENPP2Q13822 863 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 FAM98BQ52LJ0 330 aaKnown RBP9.96□□□□□ -0.81
SAMM50-206ENST00000494795 CPTPQ5TA50 214 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3GQ6DHY5 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3CQ6IPX1 549 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 ADAMTSL4Q6UY14 1074 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 HMGN2P46Q86SG4 172 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 FAM129CQ86XR2 697 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D3Q8IZP1 549 aaPredicted RBP9.96□□□□□ -0.81
SAMM50-206ENST00000494795 MFSD2AQ8NA29 543 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TSPAN14Q8NG11 270 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 NELL1Q92832 810 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 OTUB1Q96FW1 271 aaPredicted RBP9.96□□□□□ -0.81
SAMM50-206ENST00000494795 C9orf16Q9BUW7 83 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 FGF22Q9HCT0 170 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 LHX9Q9NQ69 397 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TMEM184CQ9NVA4 438 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 IRAK4Q9NWZ3 460 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 SMPD3Q9NY59 655 aaPredicted RBP9.96□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF639Q9UID6 485 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 FZD4Q9ULV1 537 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 GPR34Q9UPC5 381 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TMED5Q9Y3A6 229 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 DYRK1BQ9Y463 629 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 TRIOBPQ9H2D6 2365 aa9.96□□□□□ -0.81
SAMM50-206ENST00000494795 SCN2AQ99250 2005 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 H6PDO95479 791 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 KLF8O95600 359 aaPredicted RBP9.96□□□□□ -0.82
SAMM50-206ENST00000494795 SERPIND1P05546 499 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 CYP4B1P13584 511 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 TPP2P29144 1249 aaPredicted RBP9.96□□□□□ -0.82
SAMM50-206ENST00000494795 GSTT1P30711 240 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 ACSL1P33121 698 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 E2F2Q14209 437 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 TMTC4Q5T4D3 741 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 ATG9BQ674R7 924 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 OR5K2Q8NHB8 316 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 C16orf78Q8WTQ4 265 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 TPD52L3Q96J77 140 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 TEX101Q9BY14 249 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 ZCCHC2Q9C0B9 1178 aaKnown RBP9.96□□□□□ -0.82
SAMM50-206ENST00000494795 TOR3AQ9H497 397 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 SPHK1Q9NYA1 384 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 GPSM3Q9Y4H4 160 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 SLCO1B1Q9Y6L6 691 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 NINQ8N4C6 2090 aa9.96□□□□□ -0.82
SAMM50-206ENST00000494795 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.95□□□□□ -0.82
SAMM50-206ENST00000494795 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms