RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PCBD2Q9H0N5 130 aa10.98□□□□□ -0.65
VTI1A-208ENST00000494728 SMYD2Q9NRG4 433 aa10.98□□□□□ -0.65
VTI1A-208ENST00000494728 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
VTI1A-208ENST00000494728 OLAHQ9NV23 265 aa10.98□□□□□ -0.65
VTI1A-208ENST00000494728 PYCARDQ9ULZ3 195 aa10.98□□□□□ -0.65
VTI1A-208ENST00000494728 EML6Q6ZMW3 1958 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 CDC7O00311 574 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 TCP1P17987 556 aaKnown RBP10.97□□□□□ -0.65
VTI1A-208ENST00000494728 HRH2P25021 359 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 IL2P60568 153 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 REEP5Q00765 189 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 DR1Q01658 176 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF33BQ06732 778 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 HYAL2Q12891 473 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 BTBD16Q32M84 506 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 DEFB134Q4QY38 66 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 C1QL3Q5VWW1 255 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 DUPD1Q68J44 220 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 PLAG1Q6DJT9 500 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 FAM45BPQ6NSW5 357 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 CPEB2Q7Z5Q1 589 aaKnown RBP10.97□□□□□ -0.65
VTI1A-208ENST00000494728 LURAP1LQ8IV03 231 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 CEP97Q8IW35 865 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 PDIK1LQ8N165 341 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 BEST3Q8N1M1 668 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 CAMKVQ8NCB2 501 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 FAM45AQ8TCE6 357 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 ANKRD49Q8WVL7 239 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 HAS2Q92819 552 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 FBXL8Q96CD0 374 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 THAP11Q96EK4 314 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 SNF8Q96H20 258 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 NAT9Q9BTE0 207 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 MCMBPQ9BTE3 642 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 TUBB6Q9BUF5 446 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 SARGQ9BW04 601 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 TRIM31Q9BZY9 425 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 UNKQ9C0B0 810 aaKnown RBP10.97□□□□□ -0.65
VTI1A-208ENST00000494728 RNF32Q9H0A6 362 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 ANKHQ9HCJ1 492 aa10.97□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF407Q9C0G0 2248 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 TRAV17A0A0B4J275 112 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 FAM95CA0A1B0GW59 222 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 DYTNA2CJ06 578 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 OR5H15A6NDH6 313 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 E7ESA3 106 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 PCDH17O14917 1159 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 OR1F1O43749 312 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 GALR3O60755 368 aaPredicted RBP10.96□□□□□ -0.65
VTI1A-208ENST00000494728 ZG16O60844 167 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 WFS1O76024 890 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 UQCRHP07919 91 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 STSP08842 583 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 SLC35G6P0C7Q6 338 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 ZNF888P0CJ79 500 aaPredicted RBP10.96□□□□□ -0.65
VTI1A-208ENST00000494728 SAT1P21673 171 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 CCND1P24385 295 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 RPL21P46778 160 aaKnown RBP10.96□□□□□ -0.65
VTI1A-208ENST00000494728 SCTRP47872 440 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 CCR8P51685 355 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 AP1S2P56377 157 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 TAS2R39P59534 338 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 ABRAXAS2Q15018 415 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 SFT2D3Q587I9 215 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 PAPD4Q6PIY7 484 aaKnown RBP10.96□□□□□ -0.65
VTI1A-208ENST00000494728 PCGF5Q86SE9 256 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 FJX1Q86VR8 437 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 ZC3HC1Q86WB0 502 aaKnown RBP10.96□□□□□ -0.65
VTI1A-208ENST00000494728 CRLF3Q8IUI8 442 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 PALM2Q8IXS6 379 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 KIF2BQ8N4N8 673 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 BCORP1Q8N888 145 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 FBXO36Q8NEA4 188 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 SLC5A11Q8WWX8 675 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 METTL21AQ8WXB1 218 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 NR4A3Q92570 626 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 SIGLEC12Q96PQ1 595 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 HAUS8Q9BT25 410 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.96□□□□□ -0.65
VTI1A-208ENST00000494728 KLHL31Q9H511 634 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 ANKRD10Q9NXR5 420 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 VWA7Q9Y334 891 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 SLC22A7Q9Y694 548 aa10.96□□□□□ -0.65
VTI1A-208ENST00000494728 CCDC168Q8NDH2 2452 aa10.96□□□□□ -0.66
VTI1A-208ENST00000494728 DNAJC13O75165 2243 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 TRBC2A0A5B9 178 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 A8MUI8 341 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 WISP3O95389 354 aaPredicted RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 SERPIND1P05546 499 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 FHP07954 510 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 CYC1P08574 325 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 HIST1H2AGP0C0S8 130 aaPredicted RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 ALOX12P18054 663 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 HIST1H2ADP20671 130 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 GMPRP36959 345 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 GNG11P61952 73 aa10.95□□□□□ -0.66
VTI1A-208ENST00000494728 PDIA2Q13087 525 aaKnown RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 FRG1Q14331 258 aaKnown RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 TSNQ15631 228 aaKnown RBP10.95□□□□□ -0.66
VTI1A-208ENST00000494728 INAQ16352 499 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms