RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SETD6Q8TBK2 473 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 CCDC107Q8WV48 283 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 TMLHEQ9NVH6 421 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 METTL21EPA6NDL7 271 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 SCGNO76038 276 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 PPP1R8Q12972 351 aaKnown RBP18.55■□□□□ 0.56
COL27A1-207ENST00000494090 MEP1AQ16819 746 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 TECRLQ5HYJ1 363 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 ARHGAP40Q5TG30 622 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 AGTRAPQ6RW13 159 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 LINGO2Q7L985 606 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 SERTAD3Q9UJW9 196 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 FGF18O76093 207 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 TCEA1P23193 301 aaKnown RBP18.55■□□□□ 0.56
COL27A1-207ENST00000494090 KIAA1614Q5VZ46 1190 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 TMEM156Q8N614 296 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 RHEBL1Q8TAI7 183 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 YIPF4Q9BSR8 244 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 ACSL5Q9ULC5 683 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 SLC2A2P11168 524 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-207ENST00000494090 GGT5P36269 586 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 SIX1Q15475 284 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-207ENST00000494090 GFOD2Q3B7J2 385 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 PLEKHS1Q5SXH7 462 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF420Q8TAQ5 688 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-207ENST00000494090 IMP4Q96G21 291 aaKnown RBP18.55■□□□□ 0.56
COL27A1-207ENST00000494090 LRIG1Q96JA1 1093 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 MEAF6Q9HAF1 191 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 GIMAP2Q9UG22 337 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 TSPAN9O75954 239 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CSTF1Q05048 431 aaKnown RBP18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ALG1LQ6GMV1 187 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 C14orf80Q86SX3 495 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 OR9A1PQ8NGU1 263 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 MOAP1Q96BY2 351 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 HHATLQ9HCP6 504 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 FKBP14Q9NWM8 211 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 WNT6Q9Y6F9 365 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 FAM72CH0Y354 149 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 TNFRSF10BO14763 440 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 MMP20O60882 483 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ARSFP54793 590 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 TEAD2Q15562 447 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ATP6AP1Q15904 470 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ITPRIPL2Q3MIP1 535 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 C6orf136Q5SQH8 315 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 FAM72AQ5TYM5 149 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 FAM72DQ6L9T8 149 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CDHR3Q6ZTQ4 885 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 FAM72BQ86X60 149 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 OR8J3Q8NGG0 315 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 RAB7BQ96AH8 199 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 FIZ1Q96SL8 496 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ASPNQ9BXN1 380 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 H0YAE9 185 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CLPXO76031 633 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CD1DP15813 335 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 PPP1R3AQ16821 1122 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CLEC12AQ5QGZ9 265 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 PHF19Q5T6S3 580 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 STEAP4Q687X5 459 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CEACAM20Q6UY09 585 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 DMRTB1Q96MA1 342 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 TNFRSF10DQ9UBN6 386 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 TMEM5Q9Y2B1 443 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CD72P21854 359 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 HSD11B1P28845 292 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 CBLBQ13191 982 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 TSTQ16762 297 aaKnown RBP18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF829Q3KNS6 432 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ABCA11PQ4W5N1 156 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 NANOGP8Q6NSW7 305 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF548Q8NEK5 533 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-207ENST00000494090 RANBP9Q96S59 729 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 SLC2A11Q9BYW1 496 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 NANOGQ9H9S0 305 aa18.54■□□□□ 0.56
COL27A1-207ENST00000494090 NPIPA5E9PKD4 350 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 LEFTY2O00292 366 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 VEGFDO43915 354 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 ARL6IP5O75915 188 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 PEPDP12955 493 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 HRH2P25021 359 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 SHMT2P34897 504 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 CREB5Q02930 508 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 AQP11Q8NBQ7 271 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 ZFAND2BQ8WV99 257 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 SGCDQ92629 289 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 GMEB2Q9UKD1 530 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 NPIPA1Q9UND3 350 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 NOX1Q9Y5S8 564 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 A0A1W2PRQ8 180 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF670-ZNF695F2Z2N8 137 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 PTPRCAPQ14761 206 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 OR52E4Q8NGH9 312 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 SLC45A3Q96JT2 553 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 FBXO9Q9UK97 447 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-207ENST00000494090 GNB5O14775 395 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 MARCH9Q86YJ5 346 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 ALPK1Q96QP1 1244 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms