RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ZNF71Q9NQZ8 489 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-234ENST00000493923 RAD18Q9NS91 495 aa7.88□□□□□ -1.15
HDAC6-234ENST00000493923 MRGBPQ9NV56 204 aa7.88□□□□□ -1.15
HDAC6-234ENST00000493923 RIC8BQ9NVN3 520 aa7.88□□□□□ -1.15
HDAC6-234ENST00000493923 STMN3Q9NZ72 180 aa7.88□□□□□ -1.15
HDAC6-234ENST00000493923 SEMA5BQ9P283 1151 aa7.88□□□□□ -1.15
HDAC6-234ENST00000493923 ZMAT5Q9UDW3 170 aaKnown RBP7.88□□□□□ -1.15
HDAC6-234ENST00000493923 CCDC78A2IDD5 438 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ZNF891A8MT65 544 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 GPR89AB7ZAQ6 455 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 CLDN25C9JDP6 229 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ACOX3O15254 700 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 TP73O15350 636 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 STX7O15400 261 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 KCNN4O15554 427 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ALX3O95076 343 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 PRAMEF1O95521 474 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 METTL18O95568 372 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 BCL10O95999 233 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 POLBP06746 335 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 EBLN1P0CF75 366 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 GPR89BP0CG08 455 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 MTHFD1P11586 935 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 TPH1P17752 444 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 NELFEP18615 380 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 MAP4P27816 1152 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 PTPN7P35236 360 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 CPA2P48052 419 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 GDF10P55107 478 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 EIF3EP60228 445 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 RPS18P62269 152 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ABHD18Q0P651 414 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 KCNAB2Q13303 367 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 IGFBP7Q16270 282 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 TCHHL1Q5QJ38 904 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 LDLRAP1Q5SW96 308 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 FAM69BQ5VUD6 431 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 METRNLQ641Q3 311 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ITPRIPL1Q6GPH6 555 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 NANOGP8Q6NSW7 305 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 PWWP2BQ6NUJ5 590 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 FAM199XQ6PEV8 388 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 VASH1Q7L8A9 365 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 PRUNE1Q86TP1 453 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 AKAP14Q86UN6 197 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 SLC51BQ86UW2 128 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 AMZ2Q86W34 360 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 CARM1Q86X55 608 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 TMEM151BQ8IW70 566 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 KLHDC8BQ8IXV7 354 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 SPARTQ8N0X7 666 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 POU5F2Q8N7G0 328 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ZSCAN1Q8NBB4 408 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 CT55Q8WUE5 264 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 STON2Q8WXE9 905 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 HPS1Q92902 700 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ZNF597Q96LX8 424 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 RILPQ96NA2 401 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 TEFMQ96QE5 360 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 FRMD8P1Q9BZ68 369 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ULBP3Q9BZM4 244 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 FAM117AQ9C073 453 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 SLC25A18Q9H1K4 315 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ACSS3Q9H6R3 686 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 MARCH7Q9H992 704 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 POT1Q9NUX5 634 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 IMP3Q9NV31 184 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 SMOXQ9NWM0 555 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 EPHA6Q9UF33 1036 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 TRHDEQ9UKU6 1024 aa7.87□□□□□ -1.15
HDAC6-234ENST00000493923 WBP11Q9Y2W2 641 aaKnown RBP7.87□□□□□ -1.15
HDAC6-234ENST00000493923 ICE1Q9Y2F5 2266 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ISPDA4D126 451 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 OR6C74A6NCV1 312 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 MGAT4DA6NG13 374 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 OR51F1A6NGY5 319 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SDR42E2A6NKP2 422 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 AGAP14A8MT82 685 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 FAM25AB3EWG3 89 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 FAM25CB3EWG5 89 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 FAM25GB3EWG6 89 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 MTSS1O43312 755 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 LDB2O43679 373 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ASNA1O43681 348 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SCO2O43819 266 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 KLHL41O60662 606 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 DNAJB5O75953 348 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 CLPXO76031 633 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SRP72O76094 671 aaKnown RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PDGFAP04085 211 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 FGF5P12034 268 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 CCNA2P20248 432 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 MSH3P20585 1137 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 LPOP22079 712 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PDHA2P29803 388 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 ADSLP30566 484 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-234ENST00000493923 PKLRP30613 574 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 SERPINB1P30740 379 aa7.86□□□□□ -1.15
HDAC6-234ENST00000493923 AKT1P31749 480 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms