RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 SFTPA2Q8IWL1 248 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 ARFGAP2Q8N6H7 521 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 ANKRD53Q8N9V6 530 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 CCDC63Q8NA47 563 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 GLB1L3Q8NCI6 653 aaPredicted RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 RHEBL1Q8TAI7 183 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 STAG3L4Q8TBR4 150 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 JADE3Q92613 823 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 EXT2Q93063 718 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 SKA1Q96BD8 255 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 MOCOSQ96EN8 888 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 NEIL1Q96FI4 390 aaPredicted RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 RMDN2Q96LZ7 410 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 LMF1Q96S06 567 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 ATOH8Q96SQ7 321 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 MECRQ9BV79 373 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 MRPL46Q9H2W6 279 aaKnown RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 CNOT10Q9H9A5 744 aaKnown RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 FSCN3Q9NQT6 498 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 INTS9Q9NV88 658 aaKnown RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 UTP6Q9NYH9 597 aaKnown RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 XPR1Q9UBH6 696 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 CIDEBQ9UHD4 219 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 PDE10AQ9Y233 779 aa6.35□□□□□ -1.39
TRA2B-216ENST00000493864 CFAP20Q9Y6A4 193 aaKnown RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 ARID1BQ8NFD5 2236 aaPredicted RBP6.35□□□□□ -1.39
TRA2B-216ENST00000493864 TMEM131Q92545 1883 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 A0A1W2PR48 441 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 NCF1BA6NI72 391 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PDZK1P1A8MUH7 402 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 NCF1CA8MVU1 366 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ARHGEF33A8MVX0 844 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PATE3B3GLJ2 98 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SUPT3HB4E1H0 165 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PROB1E7EW31 1015 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SLC16A5O15375 505 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 YY2O15391 372 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 BIRC5O15392 142 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 TAPBPO15533 448 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PRAMEF4O60810 478 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 KERAO60938 352 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SMIM24O75264 130 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PSIP1O75475 530 aaKnown RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SUPT3HO75486 399 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 TOX4O94842 621 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 C1orf105O95561 183 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 GUCA1CO95843 209 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 CFIP05156 583 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 C8GP07360 202 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SLC35G4P0C7Q5 338 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 TPBGLP0DKB5 382 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 MYL2P10916 166 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 NCF1P14598 390 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 TAC1P20366 129 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 HOXA5P20719 270 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ATP5F1P24539 256 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 MDH1P40925 334 aaKnown RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ACTR1BP42025 376 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 KIR2DL3P43628 341 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 BDKRB1P46663 353 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 BLKP51451 505 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 KPNA2P52292 529 aaKnown RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ACTR1AP61163 376 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 HNRNPKP61978 463 aaKnown RBP eCLIP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ILF3Q12906 894 aaKnown RBP eCLIP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PRKG2Q13237 762 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PCLAFQ15004 111 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SHBQ15464 509 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ADRM1Q16186 407 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 CCDC6Q16204 474 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 RPE65Q16518 533 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PPP1R3AQ16821 1122 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PFKFB4Q16877 469 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 DUOXA1Q1HG43 343 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 C18orf21Q32NC0 220 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 UAP1L1Q3KQV9 507 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 FBXO48Q5FWF7 155 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 CES4AQ5XG92 561 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 DUS1LQ6P1R4 473 aaKnown RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ABRAXAS1Q6UWZ7 409 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 MBOAT1Q6ZNC8 495 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ADAMTSL2Q86TH1 951 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 TAX1BP1Q86VP1 789 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 NUDCD3Q8IVD9 361 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 LMNTD1Q8N9Z9 388 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 SUMF1Q8NBK3 374 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 FAM46DQ8NEK8 389 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 OR5AR1Q8NGP9 310 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 RDH11Q8TC12 318 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 MCOLN3Q8TDD5 553 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 LMX1AQ8TE12 382 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 CKAP2Q8WWK9 683 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PATE1Q8WXA2 126 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 ZNF75CPQ92670 426 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 TFGQ92734 400 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-216ENST00000493864 PHF21BQ96EK2 531 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 FOPNLQ96NB1 174 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 CAMK1GQ96NX5 476 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 NRTNQ99748 197 aa6.34□□□□□ -1.39
TRA2B-216ENST00000493864 DPYSL5Q9BPU6 564 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms