RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SNX25Q9H3E2 840 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 PHPT1Q9NRX4 125 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-216ENST00000493758 AGTPBP1Q9UPW5 1226 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 MYH15Q9Y2K3 1946 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 RNF123Q5XPI4 1314 aa3.44□□□□□ -1.86
ITGB1-216ENST00000493758 hCG_38984A0A1B0GV85 526 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ACOD1A6NK06 481 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 TSPY2A6NKD2 308 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 TMEM150CB9EJG8 249 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 FLRT2O43155 660 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ECE2O60344 883 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 HOXD4P09016 255 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 QDPRP09417 244 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ALDH1B1P30837 517 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 GPR183P32249 361 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ETV5P41161 510 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 PRELPP51888 382 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ERVK-16P61578 105 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 DHODHQ02127 395 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 TNK1Q13470 666 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 DUSP5Q16690 384 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 LBHQ53QV2 105 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 LRRC73Q5JTD7 316 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 C1orf141Q5JVX7 400 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 MOXD1Q6UVY6 613 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 Q6ZR54 194 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 CDHR3Q6ZTQ4 885 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ADCK2Q7Z695 626 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 DNAJB7Q7Z6W7 309 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 SLFN11Q7Z7L1 901 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 CCAR2Q8N163 923 aaKnown RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ABHD12Q8N2K0 398 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 CCDC63Q8NA47 563 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 NCOA7Q8NI08 942 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 GRK7Q8WTQ7 553 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 CHPT1Q8WUD6 406 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ERO1AQ96HE7 468 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 RAB3IPQ96QF0 476 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 BAG1Q99933 345 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 KATNB1Q9BVA0 655 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 UBQLN3Q9H347 655 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 RIMS4Q9H426 269 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 GPN1Q9HCN4 374 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-216ENST00000493758 RPS10P5Q9NQ39 176 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 PRR34Q9NV39 138 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 KLK4Q9Y5K2 254 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 ZHX2Q9Y6X8 837 aa3.43□□□□□ -1.86
ITGB1-216ENST00000493758 A0A1W2PPW3 197 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 C5orf52A6NGY3 159 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 A8MVM7 634 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 A8MXK9 166 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 NPIPA3F8WFD2 350 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 PENKP01210 267 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-216ENST00000493758 FDPSP14324 419 aaKnown RBP3.42□□□□□ -1.86
ITGB1-216ENST00000493758 SELEP16581 610 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 CAPGP40121 348 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 ZFP36L2P47974 494 aaKnown RBP3.42□□□□□ -1.86
ITGB1-216ENST00000493758 NPY4RP50391 375 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 KIAA0141Q14154 515 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-216ENST00000493758 FAM189A2Q15884 450 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 BTNL8Q6UX41 500 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 COX8CQ7Z4L0 72 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 SLC39A11Q8N1S5 342 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 TEX26Q8N6G2 289 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-216ENST00000493758 TCEANCQ8N8B7 351 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 OR5M9Q8NGP3 310 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 NSMAFQ92636 917 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 IL12RB2Q99665 862 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 MGME1Q9BQP7 344 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 INPP5KQ9BT40 448 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 RPP25Q9BUL9 199 aaKnown RBP3.42□□□□□ -1.86
ITGB1-216ENST00000493758 EDEM3Q9BZQ6 932 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 FNDC4Q9H6D8 234 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-216ENST00000493758 GTSE1Q9NYZ3 720 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 NLGN3Q9NZ94 848 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 UBQLN2Q9UHD9 624 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 SLC12A6Q9UHW9 1150 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 AGRNO00468 2067 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 NEDD4P46934 1319 aa3.42□□□□□ -1.86
ITGB1-216ENST00000493758 TDRD15B5MCY1 1934 aaKnown RBP3.41□□□□□ -1.86
ITGB1-216ENST00000493758 HTR3EA5X5Y0 456 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 PRAF2O60831 178 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 FCGR3BO75015 233 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 PGLSO95336 258 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 STAG3L1P0CL83 205 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 FOLR2P14207 255 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 CAPN2P17655 700 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 PKLRP30613 574 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 LIMK2P53671 638 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 FKBP3Q00688 224 aaKnown RBP3.41□□□□□ -1.86
ITGB1-216ENST00000493758 ZNF146Q15072 292 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 SPANXN4Q5MJ08 99 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 SHEQ5VZ18 495 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 FAM91A1Q658Y4 838 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 ZNF770Q6IQ21 691 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-216ENST00000493758 KLHL10Q6JEL2 608 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 SUSD1Q6UWL2 747 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 MACC1Q6ZN28 852 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms