RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TXNDC9O14530 226 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 LCMT2O60294 686 aaKnown RBP11.03□□□□□ -0.64
CTSA-209ENST00000493522 PLIN3O60664 434 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 KATNA1O75449 491 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 PROCP04070 461 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 RPS17P08708 135 aaKnown RBP11.03□□□□□ -0.64
CTSA-209ENST00000493522 MYZAPP0CAP1 466 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 EPORP19235 508 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 AGXTP21549 392 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 ALAS2P22557 587 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 ATP5F1P24539 256 aaPredicted RBP11.03□□□□□ -0.64
CTSA-209ENST00000493522 CASRP41180 1078 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 SCTRP47872 440 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 RGS1Q08116 209 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 LAPTM5Q13571 262 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 DNASE1L3Q13609 305 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 DOC2AQ14183 400 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 CASP8Q14790 479 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 RBBP7Q16576 425 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 PRTGQ2VWP7 1150 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 FAM214AQ32MH5 1076 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 PAGE2BQ5JRK9 111 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 FAM199XQ6PEV8 388 aaPredicted RBP11.03□□□□□ -0.64
CTSA-209ENST00000493522 ZYG11AQ6WRX3 759 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 SLC22A9Q8IVM8 553 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 TMEM151AQ8N4L1 468 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 CAMKVQ8NCB2 501 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 C9orf43Q8TAL5 461 aaPredicted RBP11.03□□□□□ -0.64
CTSA-209ENST00000493522 PPP4R1Q8TF05 950 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 CCT6BQ92526 530 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 ATP6V1E2Q96A05 226 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 SLC45A3Q96JT2 553 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 C10orf90Q96M02 699 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 GBP5Q96PP8 586 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 MACROD1Q9BQ69 325 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 CHST8Q9H2A9 424 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 C12orf65Q9H3J6 166 aaKnown RBP11.03□□□□□ -0.64
CTSA-209ENST00000493522 EHD1Q9H4M9 534 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 IPPKQ9H8X2 491 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 ACTR8Q9H981 624 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 MKS1Q9NXB0 559 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 SENP1Q9P0U3 644 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 MID2Q9UJV3 735 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 CROTQ9UKG9 612 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 PCTPQ9UKL6 214 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 PADI1Q9ULC6 663 aa11.03□□□□□ -0.64
CTSA-209ENST00000493522 KCNE1BA0A087WTH5 132 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 GOLGA6L10A6NI86 522 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 DLX3O60479 287 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 PRAMEF4O60810 478 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 MED26O95402 600 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 PCNAP12004 261 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 TCN2P20062 427 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 CD22P20273 847 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 AHRP35869 848 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 GCGRP47871 477 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 CCNG1P51959 295 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 HERVK_113P63132 956 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 FOXK1P85037 733 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 HIST2H2ACQ16777 129 aaPredicted RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 NDUFA9Q16795 377 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 PRAMEF9Q5VWM5 478 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 ZNF385CQ66K41 422 aaPredicted RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 HIST2H2AA3Q6FI13 130 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 METTL2BQ6P1Q9 378 aaKnown RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 FAM198BQ6UWH4 519 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 TMIGD1Q6UXZ0 262 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 RPS27LQ71UM5 84 aaKnown RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 DTWD1Q8N5C7 304 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 BANPQ8N9N5 519 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 ANKRD53Q8N9V6 530 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 ARMC2Q8NEN0 867 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 RDH11Q8TC12 318 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 ZNF483Q8TF39 744 aaPredicted RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 SLC13A3Q8WWT9 602 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 CCDC126Q96EE4 140 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 MOCOSQ96EN8 888 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 WDR34Q96EX3 536 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 NSUN5Q96P11 429 aaKnown RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 TMEM237Q96Q45 408 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 DPH2Q9BQC3 489 aaPredicted RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 SARGQ9BW04 601 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 ERVK-6Q9BXR3 956 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 NOL11Q9H8H0 719 aaKnown RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 AKIRIN1Q9H9L7 192 aaPredicted RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 SEMA4BQ9NPR2 832 aaPredicted RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 ACSS2Q9NR19 701 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 GPN3Q9UHW5 284 aaPredicted RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 ZFP69BQ9UJL9 534 aa11.02□□□□□ -0.65
CTSA-209ENST00000493522 MRPS2Q9Y399 296 aaKnown RBP11.02□□□□□ -0.65
CTSA-209ENST00000493522 TEX15Q9BXT5 2789 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 G3V2L1 256 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 SUPT7LO94864 414 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 PRKAR1AP10644 381 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 GP1BBP13224 206 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 IL1RNP18510 177 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 TSPAN8P19075 237 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 FBLP22087 321 aaKnown RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 OR1D4P47884 311 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms