RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FTCDO95954 541 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 HSP90AA1P07900 732 aaKnown RBP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 HMBSP08397 361 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ERVK-10P10266 1014 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 HAPLN1P10915 354 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ODC1P11926 461 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 TDGF1P13385 188 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 GNB3P16520 340 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 BCKDHBP21953 392 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ELF1P32519 619 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 PGM1P36871 562 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 GABRB2P47870 512 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 GCLMP48507 274 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 STX17P56962 302 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 CYP24A1Q07973 514 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 NCBP1Q09161 790 aaKnown RBP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ORC2Q13416 577 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 BIRC3Q13489 604 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 FAM182AQ5T1J6 154 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ATG16L1Q676U5 607 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 SIGIRRQ6IA17 410 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 SLC22A25Q6T423 547 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 PAQR9Q6ZVX9 377 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 TRPT1Q86TN4 253 aaKnown RBP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ACOT1Q86TX2 421 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 GPR180Q86V85 440 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 MARCH9Q86YJ5 346 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 CSGALNACT2Q8N6G5 542 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 SUMF1Q8NBK3 374 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ZNF461Q8TAF7 563 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 KCNG4Q8TDN1 519 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 RLN3Q8WXF3 142 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 PAGE5Q96GU1 130 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 PCED1BQ96HM7 432 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 HPDLQ96IR7 371 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ACCSQ96QU6 501 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ACOX2Q99424 681 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 RAB34Q9BZG1 259 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ELOVL4Q9GZR5 314 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 TKTL2Q9H0I9 626 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 LINC00597Q9H2U6 94 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 NMUR1Q9HB89 426 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 APOBEC3GQ9HC16 384 aaKnown RBP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 UBN1Q9NPG3 1134 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ASAH2Q9NR71 780 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 AGPAT3Q9NRZ7 376 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 GKN1Q9NS71 199 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 OSER1Q9NX31 292 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 CLEC4EQ9ULY5 219 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 CEPT1Q9Y6K0 416 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 NUP210LQ5VU65 1888 aa2.9□□□□□ -1.94
PTCD3-218ENST00000493430 KMT2BQ9UMN6 2715 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 KANSL1LA0AUZ9 987 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 GAGE10A6NGK3 116 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 KRTAP16-1A8MUX0 517 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 KPNA7A9QM74 516 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 SPECC1L-ADORA2AF8WAN1 911 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 NCAM2O15394 837 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 AKAP3O75969 853 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 TBX18O95935 607 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 HLA-DRAP01903 254 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 NR3C1P04150 777 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 RPN1P04843 607 aaKnown RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 HNRNPA1P09651 372 aaKnown RBP eCLIP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF26P17031 533 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 TNNI1P19237 187 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 AHRP35869 848 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 OPRD1P41143 372 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 NBL1P41271 181 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 PIK3CAP42336 1068 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 ARCN1P48444 511 aaKnown RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 SGSHP51688 502 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 CLDN6P56747 220 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 TAS2R38P59533 333 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 LMO4P61968 165 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 PLIN5Q00G26 463 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 TAF10Q12962 218 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 GPR17Q13304 367 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF77Q15935 545 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 SNRNP35Q16560 246 aaKnown RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 CBWD6Q4V339 395 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 TECRLQ5HYJ1 363 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 CBWD3Q5JTY5 395 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 KLHL10Q6JEL2 608 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 FAM53AQ6NSI3 398 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 RBMS3Q6XE24 437 aaKnown RBP2.9□□□□□ -1.95
PTCD3-218ENST00000493430 KDM7AQ6ZMT4 941 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 BBS12Q6ZW61 710 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 PLEKHM3Q6ZWE6 761 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 HAPLN4Q86UW8 402 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 KBTBD6Q86V97 674 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 BBS7Q8IWZ6 715 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 UBALD2Q8IYN6 164 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 BEST3Q8N1M1 668 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 MYRIPQ8NFW9 859 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 HMGCLL1Q8TB92 370 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 THAP6Q8TBB0 222 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 WFDC5Q8TCV5 224 aa2.9□□□□□ -1.95
PTCD3-218ENST00000493430 SLC38A5Q8WUX1 472 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms