RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 FAM167BQ9BTA0 163 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 SYNPO2LQ9H987 977 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 PARVBQ9HBI1 364 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ANKHQ9HCJ1 492 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 STOX2Q9P2F5 926 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ITGB1BP2Q9UKP3 347 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 ZNF835Q9Y2P0 537 aa8.62□□□□□ -1.03
HDAC3-212ENST00000492407 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 ARHGAP10A1A4S6 786 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 MAGEB17A8MXT2 336 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 P2RX6O15547 441 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SLC19A2O60779 497 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 AVILO75366 819 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SNUPNO95149 360 aaKnown RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 KRT14P02533 472 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 HIST1H2AGP0C0S8 130 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SLC35G6P0C7Q6 338 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 CD46P15529 392 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 HIST1H2ADP20671 130 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 MST1P26927 711 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 MAGEA3P43357 314 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 XCR1P46094 333 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TAS2R50P59544 299 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 CSNK1G2P78368 415 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 MAT1AQ00266 395 aaKnown RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 CTBP1Q13363 440 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 PWP1Q13610 501 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TSTA3Q13630 321 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TUBA3CQ13748 450 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SYT16Q17RD7 645 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 BTBD16Q32M84 506 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 MINDY4Q4G0A6 757 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 FAAH2Q6GMR7 532 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TUBA3EQ6PEY2 450 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 LCTLQ6UWM7 567 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 KIAA0408Q6ZU52 694 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 ANKRD37Q7Z713 158 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 GALNT7Q86SF2 657 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 ASPGQ86U10 573 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 C17orf64Q86WR6 236 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SRRM1Q8IYB3 904 aaKnown RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 EID3Q8N140 333 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 RASGEF1CQ8N431 466 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TBC1D19Q8N5T2 526 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SLC5A8Q8N695 610 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TMEM178AQ8NBL3 297 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 MFSD9Q8NBP5 474 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 FAM98AQ8NCA5 519 aaKnown RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 PPFIBP2Q8ND30 876 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 MDS2Q8NDY4 140 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 ARMC2Q8NEN0 867 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 ABHD11Q8NFV4 315 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 OR4K1Q8NGD4 311 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 OR9A4Q8NGU2 314 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SLC13A3Q8WWT9 602 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 ZNF669Q96BR6 464 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 FAM136AQ96C01 138 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SCMH1Q96GD3 660 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 CCDC120Q96HB5 630 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 HIST1H2AHQ96KK5 128 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 GPR137Q96N19 417 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SERPINB12Q96P63 405 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 LPAR4Q99677 370 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 GPR21Q99679 349 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SLC30A3Q99726 388 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 HIST1H2AJQ99878 128 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 UTP23Q9BRU9 249 aaKnown RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 NAT9Q9BTE0 207 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 AARSD1Q9BTE6 412 aaKnown RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 H2AFJQ9BTM1 129 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 SGPP1Q9BX95 441 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TRIM45Q9H8W5 580 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 PLSCR2Q9NRY7 297 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 C20orf96Q9NUD7 363 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-212ENST00000492407 TAS2R13Q9NYV9 303 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 FBXO5Q9UKT4 447 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 N6AMT1Q9Y5N5 214 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 CCDC88CQ9P219 2028 aa8.61□□□□□ -1.03
HDAC3-212ENST00000492407 APCP25054 2843 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 A8MUI8 341 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 FFAR3O14843 346 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 GPR42O15529 346 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 SEC24DO94855 1032 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 TTC4O95801 387 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 CELA2AP08217 269 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 PRF1P14222 555 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 NPPBP16860 134 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 JAK1P23458 1154 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 HTR1EP28566 365 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 EEF1DP29692 281 aaKnown RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 CD96P40200 585 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 SLC1A2P43004 574 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 EFNA3P52797 238 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 AP1S2P56377 157 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 TBPL1P62380 186 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 RHAGQ02094 409 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 ACTN3Q08043 901 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-212ENST00000492407 CUL1Q13616 776 aa8.6□□□□□ -1.03
HDAC3-212ENST00000492407 NSDHLQ15738 373 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms