RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ACER2Q5QJU3 275 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 FAAH2Q6GMR7 532 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 FAM45BPQ6NSW5 357 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 NIPAL1Q6NVV3 410 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 LANCL3Q6ZV70 420 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 CYS1Q717R9 158 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 ZC3HC1Q86WB0 502 aaKnown RBP7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 PALM2Q8IXS6 379 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC34A3Q8N130 599 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 LGI4Q8N135 537 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 MDS2Q8NDY4 140 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 FAM45AQ8TCE6 357 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 ELP5Q8TE02 316 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 METTL21AQ8WXB1 218 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 ATL1Q8WXF7 558 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 NEIL2Q969S2 332 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 MOCOSQ96EN8 888 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 HIST1H2AHQ96KK5 128 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 PWWP2AQ96N64 755 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 RUNDC3BQ96NL0 473 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 HIST1H2AJQ99878 128 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 H2AFJQ9BTM1 129 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 YIPF2Q9BWQ6 316 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC6A16Q9GZN6 736 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 SPNS1Q9H2V7 528 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 ANKHQ9HCJ1 492 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC17A6Q9P2U8 582 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 C19orf25Q9UFG5 118 aaPredicted RBP7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 ASIC3Q9UHC3 531 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 TEKT2Q9UIF3 430 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 ZFP69BQ9UJL9 534 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 NAALAD2Q9Y3Q0 740 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 PSAT1Q9Y617 370 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 APCP25054 2843 aa7.89□□□□□ -1.15
SMARCB1-207ENST00000491967 IGHV3-20A0A0C4DH32 117 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 A1L4Q6 167 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CTAGE15A4D2H0 777 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ASPDHA6ND91 283 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 USP27XA6NNY8 438 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CCDC188H7C350 402 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 PRAMEF2O60811 474 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 RDH16O75452 317 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 WISP2O76076 250 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 SEC24DO94855 1032 aaPredicted RBP7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CRYABP02511 175 aaKnown RBP7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 C1QAP02745 245 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 STATHP02808 62 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC35G6P0C7Q6 338 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 MYBL2P10244 700 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ALOX12P18054 663 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 COL8A1P27658 744 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 GRK3P35626 688 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 REEP5Q00765 189 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 DR1Q01658 176 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ILF2Q12905 390 aaKnown RBP7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 PDAP1Q13442 181 aaKnown RBP7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CDKL4Q5MAI5 379 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CATSPEREQ5SY80 951 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ABHD17BQ5VST6 288 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CTAGE6Q86UF2 777 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ANKRD53Q8N9V6 530 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CREB3L4Q8TEY5 395 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 TBC1D20Q96BZ9 403 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 PYCR2Q96C36 320 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 SCMH1Q96GD3 660 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF354BQ96LW1 612 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 TRIM54Q9BYV2 358 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 AICDAQ9GZX7 198 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 PELI2Q9HAT8 420 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 GRPEL1Q9HAV7 217 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 POPDC3Q9HBV1 291 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ABCF3Q9NUQ8 709 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 HCN3Q9P1Z3 774 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 PPIEQ9UNP9 301 aaKnown RBP7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 OSGIN2Q9Y236 505 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF835Q9Y2P0 537 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CLDN16Q9Y5I7 305 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CACNA1CQ13936 2221 aa7.88□□□□□ -1.15
SMARCB1-207ENST00000491967 CDC7O00311 574 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 CHST10O43529 356 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 OR1F1O43749 312 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 MAN1A2O60476 641 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 RASAL1O95294 804 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 TBX6O95947 436 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 FHP07954 510 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SERPINA6P08185 405 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 GGT5P36269 586 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 CD96P40200 585 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC6A12P48065 614 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 HNMTP50135 292 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 ITGA8P53708 1063 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 ARL4CP56559 192 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 PER3P56645 1201 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC26A5P58743 744 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 TAS2R39P59534 338 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 MEF2AQ02078 507 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 MGAT5Q09328 741 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 TUBA3CQ13748 450 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 E2F2Q14209 437 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 CSHL1Q14406 222 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms