RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZNF460Q14592 562 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 FAM83EQ2M2I3 478 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PPP4R4Q6NUP7 873 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 IGF2-ASQ6U949 168 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 HACD2Q6Y1H2 254 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 CEP97Q8IW35 865 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PACRGLQ8N7B6 248 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 ANKFN1Q8N957 763 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 FAM47BQ8NA70 645 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TNIP2Q8NFZ5 429 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 SLCO4A1Q96BD0 722 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TMIGD2Q96BF3 282 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TGM7Q96PF1 710 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 SLC30A3Q99726 388 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 SLC29A1Q99808 456 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 DPYSL5Q9BPU6 564 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PLGRKTQ9HBL7 147 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TBCCD1Q9NVR7 557 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PISDQ9UG56 409 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 CD300AQ9UGN4 299 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 GNPTGQ9UJJ9 305 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 MED16Q9Y2X0 877 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 FIS1Q9Y3D6 152 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 KMT2BQ9UMN6 2715 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TPRP12270 2363 aaKnown RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 LAMA5O15230 3695 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 FBP2O00757 339 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ZSCAN9O15535 394 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 AKAP10O43572 662 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 NRP2O60462 931 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 PGGT1BP53609 377 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 POU4F1Q01851 419 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 GALNT1Q10472 559 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TRA2AQ13595 282 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 PLCL1Q15111 1095 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 SYTL3Q4VX76 610 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 NHSL2Q5HYW2 709 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 KLHL35Q6PF15 583 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 CNSTQ6PJW8 725 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 CYP2R1Q6VVX0 501 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 FAM92BQ6ZTR7 304 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ZNF554Q86TJ5 538 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TRIM73Q86UV7 250 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 SLC22A15Q8IZD6 547 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 PCYOX1LQ8NBM8 494 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 OR4E2Q8NGC2 313 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 OR52E1Q8NGJ3 308 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ZFPM2Q8WW38 1151 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TFAP2CQ92754 450 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ELMO2Q96JJ3 720 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TRIM15Q9C019 465 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 XKR8Q9H6D3 395 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 INTS10Q9NVR2 710 aaKnown RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ARMC1Q9NVT9 282 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TMEM181Q9P2C4 612 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 FBXO5Q9UKT4 447 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 COLEC10Q9Y6Z7 277 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 SH3PXD2BA1X283 911 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 OR6C74A6NCV1 312 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 IFRD1O00458 451 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 IPO13O94829 963 aaKnown RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 SLCO2B1O94956 709 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 PKMP14618 531 aaKnown RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 MAPK10P53779 464 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TAS2R39P59534 338 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 STX1BP61266 288 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ABRQ12979 859 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 EIF3IQ13347 325 aaKnown RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 KRT33BQ14525 404 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 C6orf10Q5SRN2 563 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 INTS11Q5TA45 600 aaKnown RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 CUZD1Q86UP6 607 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 PLXDC1Q8IUK5 500 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 SPATA6LQ8N4H0 392 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 BMPERQ8N8U9 685 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 GABPB2Q8TAK5 448 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-219ENST00000491747 USP7Q93009 1102 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 TMEM159Q96B96 161 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ROPN1LQ96C74 230 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 PPM1MQ96MI6 270 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 CMKLR1Q99788 373 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 HGH1Q9BTY7 390 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 RAB33BQ9H082 229 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 PLAGL1Q9UM63 463 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 ASF1AQ9Y294 204 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 HEBP2Q9Y5Z4 205 aa9.04□□□□□ -0.96
BRCA1-219ENST00000491747 OR5K3A6NET4 321 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 BBIP1A8MTZ0 92 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 C9orf172C9J069 976 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 BTN3A3O00478 584 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 TIPRLO75663 272 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 ESR1P03372 595 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 JMJD7P0C870 316 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 NELFEP18615 380 aaKnown RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 RBMS1P29558 406 aaKnown RBP9.03□□□□□ -0.96
BRCA1-219ENST00000491747 TTKP33981 857 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 GRIA3P42263 894 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 NME5P56597 212 aa9.03□□□□□ -0.96
BRCA1-219ENST00000491747 TIAL1Q01085 375 aaKnown RBP eCLIP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms