RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 TLDC2A0PJX2 215 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 URADA6NGE7 173 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 VSTM2BA6NLU5 285 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 FOXO6A8MYZ6 492 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 H0YIG0 161 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 E2F3O00716 465 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SIX3O95343 332 aaPredicted RBP15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SERPINA6P08185 405 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SBK3P0C264 359 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CD22P20273 847 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TAC1P20366 129 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 OTX2P32243 289 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 FOXL2P58012 376 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 OCA2Q04671 838 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PCDH1Q08174 1060 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GTF2H2Q13888 395 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 E2F2Q14209 437 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SSPNQ14714 243 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HERC3Q15034 1050 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HIST2H2ACQ16777 129 aaPredicted RBP15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LINC00303Q3SY05 128 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HIST2H2AA3Q6FI13 130 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GTF2H2CQ6P1K8 395 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ABHD13Q7L211 337 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GOLGA7Q7Z5G4 137 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TMEM151AQ8N4L1 468 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 STT3BQ8TCJ2 826 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CREB3L4Q8TEY5 395 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SEC16BQ96JE7 1060 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SPSB2Q99619 263 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ARHGAP9Q9BRR9 750 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 YIPF2Q9BWQ6 316 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SLC6A16Q9GZN6 736 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SOX17Q9H6I2 414 aaPredicted RBP15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TRPC4Q9UBN4 977 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 DCDC2Q9UHG0 476 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MAP4K5Q9Y4K4 846 aa15.45■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ANKDD1BA6NHY2 528 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 A8MT66 165 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ATXN7O15265 892 aaPredicted RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GLRA3O75311 464 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 WFS1O76024 890 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 KLHL18O94889 574 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 UMODP07911 640 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZGLP1P0C6A0 271 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ALOX12P18054 663 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CCR10P46092 362 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 STXBP1P61764 594 aaKnown RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 HYAL2Q12891 473 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TOR1AIP1Q5JTV8 583 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GRHL2Q6ISB3 625 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PCSK4Q6UW60 755 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SHISA6Q6ZSJ9 500 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 AFAP1L2Q8N4X5 818 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 APOBEC4Q8WW27 367 aaKnown RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CCT6BQ92526 530 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 UBE2E3Q969T4 207 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MIEF2Q96C03 454 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 WBP1Q96G27 269 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ROPN1BQ9BZX4 212 aaPredicted RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ROPN1Q9HAT0 212 aaPredicted RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MKKSQ9NPJ1 570 aaPredicted RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 C14orf105Q9NVL8 296 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RALYQ9UKM9 306 aaKnown RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZNF490Q9ULM2 529 aaPredicted RBP15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PLAAQ9Y263 795 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 NAALAD2Q9Y3Q0 740 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ITPR1Q14643 2758 aa15.44■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SGK494L7N484 410 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 FFAR3O14843 346 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GPR42O15529 346 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RDH16O75452 317 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CLEC3AO75596 197 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RPS17P08708 135 aaKnown RBP15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ZNF888P0CJ79 500 aaPredicted RBP15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SKP1P63208 163 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MAT1AQ00266 395 aaKnown RBP15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SYT16Q17RD7 645 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LIPJQ5W064 366 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 NIPAL1Q6NVV3 410 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 MED27Q6P2C8 311 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 SH2D5Q6ZV89 423 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 VN1R5Q7Z5H4 357 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PDSS2Q86YH6 399 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TMEM151BQ8IW70 566 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PRSS58Q8IYP2 241 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 UTP15Q8TED0 518 aaKnown RBP15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 IP6K3Q96PC2 410 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 CRB3Q9BUF7 120 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 TGIF2Q9GZN2 237 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 RHBGQ9H310 441 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 IPPKQ9H8X2 491 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 ACTR8Q9H981 624 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 LGALS13Q9UHV8 139 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PCTPQ9UKL6 214 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 KCNMB2Q9Y691 235 aa15.43■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 UGDHO60701 494 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 GALR3O60755 368 aaPredicted RBP15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 IGHEP01854 428 aa15.42■□□□□ 0.06
MSH5-SAPCD1-206ENST00000491552 PCNAP12004 261 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms