RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 KLHL3Q9UH77 587 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 DCTN4Q9UJW0 460 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 PLCL2Q9UPR0 1127 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 TMED5Q9Y3A6 229 aa12.76□□□□□ -0.37
TRAIP-210ENST00000489948 WDFY3Q8IZQ1 3526 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 A0A0G2JND7 137 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 A0A0J9YVX5 310 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 FITM1A5D6W6 292 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 LRIT2A6NDA9 550 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 H0YGG7 62 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 H3BMH7 237 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 PRAMEF10O60809 474 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 DIAPH2O60879 1101 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 LINC00032P0C843 101 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 CEACAM1P13688 526 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 EPHA3P29320 983 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ARL4DP49703 201 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 NEK2P51955 445 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ARFIP2P53365 341 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 EMP3P54852 163 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ARF3P61204 181 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 STXBP1P61764 594 aaKnown RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ACY1Q03154 408 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 TBL3Q12788 808 aaKnown RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 HYAL2Q12891 473 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 TUBB3Q13509 450 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 DDX39BQ13838 428 aaKnown RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 NR6A1Q15406 480 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 PRTGQ2VWP7 1150 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ATP6AP1LQ52LC2 224 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 SPIN4Q56A73 249 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 TCTE1Q5JU00 501 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 DEPDC1Q5TB30 811 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 VWA5B1Q5TIE3 1220 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 GKAP1Q5VSY0 366 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 KHDRBS2Q5VWX1 349 aaKnown RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 FRMPD2BQ6IN97 320 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ZFAND4Q86XD8 727 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 MCATQ8IVS2 390 aaKnown RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 CACTIN-AS1Q8N1I8 211 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ARHGEF39Q8N4T4 335 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 CEP70Q8NHQ1 597 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 BCAS4Q8TDM0 211 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 SLC13A3Q8WWT9 602 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 FCRL4Q96PJ5 515 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 ELAC2Q9BQ52 826 aaKnown RBP12.75□□□□□ -0.37
TRAIP-210ENST00000489948 EBF4Q9BQW3 602 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 CENPKQ9BS16 269 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 NLNQ9BYT8 704 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 FANCEQ9HB96 536 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 C1orf109Q9NX04 203 aa12.75□□□□□ -0.37
TRAIP-210ENST00000489948 URADA6NGE7 173 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 NDUFAB1O14561 156 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 P2RX6O15547 441 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 SCELO95171 688 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 ETHE1O95571 254 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 PCSK2P16519 638 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 HNRNPH1P31943 449 aaKnown RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 GCGRP47871 477 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 MRPL19P49406 292 aaKnown RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 ERVK-8P63133 956 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 CYP4F2P78329 520 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 CBX1P83916 185 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 HMGCS1Q01581 520 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 MAD2L1Q13257 205 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 KIAA0040Q15053 153 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 DEFB110Q30KQ9 67 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 SGO1Q5FBB7 561 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 SNAP47Q5SQN1 464 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 GARNL3Q5VVW2 1013 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 METTL21CQ5VZV1 264 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 GALNT18Q6P9A2 607 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 CHSY3Q70JA7 882 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 B3GNT8Q7Z7M8 397 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 PARP9Q8IXQ6 854 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 KIAA2013Q8IYS2 634 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 METTL4Q8N3J2 472 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 RNF175Q8N4F7 328 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 CSNK1A1LQ8N752 337 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 ANKS4BQ8N8V4 417 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 SRFBP1Q8NEF9 429 aaKnown RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 OR8K5Q8NH50 307 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 GAL3ST3Q96A11 431 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 TUBGCP3Q96CW5 907 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 LIN37Q96GY3 246 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 OR52B2Q96RD2 323 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 ZNF717Q9BY31 904 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 REXO4Q9GZR2 422 aaKnown RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-210ENST00000489948 AKTIPQ9H8T0 292 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 LRTM1Q9HBL6 345 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 MRGBPQ9NV56 204 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 ADAM29Q9UKF5 820 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 SLC12A4Q9UP95 1085 aa12.74□□□□□ -0.37
TRAIP-210ENST00000489948 CNOT1A5YKK6 2376 aaKnown RBP12.73□□□□□ -0.37
TRAIP-210ENST00000489948 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-210ENST00000489948 LOC105369274A0A096LPK9 316 aa12.73□□□□□ -0.37
TRAIP-210ENST00000489948 LOC102723532A0A0G2JNH3 316 aa12.73□□□□□ -0.37
TRAIP-210ENST00000489948 ATP6AP2A0A1C7CYW4 349 aa12.73□□□□□ -0.37
TRAIP-210ENST00000489948 PLPP1O14494 284 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms