RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 COX15Q7KZN9 410 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 GOLGA7Q7Z5G4 137 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 TRABD2AQ86V40 505 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 RAB43Q86YS6 212 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 LAS2Q8IYD9 372 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 IQCKQ8N0W5 287 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 CYP4X1Q8N118 509 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 AFAP1L2Q8N4X5 818 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 TEX9Q8N6V9 391 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 L3MBTL4Q8NA19 623 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 LSM14AQ8ND56 463 aaKnown RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 OR2Y1Q8NGV0 311 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 OR2W6PQ8NHA6 318 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 CREB3L4Q8TEY5 395 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 ESAMQ96AP7 390 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 REPS1Q96D71 796 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 L3HYPDHQ96EM0 354 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 WBP1Q96G27 269 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 PKNOX2Q96KN3 472 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 NTMT1Q9BV86 223 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 ERVK-6Q9BXR3 956 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 TGIF2Q9GZN2 237 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 ANKHQ9HCJ1 492 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 MKKSQ9NPJ1 570 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 SLC22A11Q9NSA0 550 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 ZNF282Q9UDV7 671 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-212ENST00000489728 MAP4K5Q9Y4K4 846 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 PCDHGA11Q9Y5H2 935 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 SEC16AO15027 2179 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 LAMA5O15230 3695 aa10.53□□□□□ -0.72
CPSF7-212ENST00000489728 A0A088AWK7 358 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 TLDC2A0PJX2 215 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 VSTM2BA6NLU5 285 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 H0YIV9 168 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 H3BQF6 201 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 GOLGA8RI6L899 631 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ERVH48-1M5A8F1 160 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 FOXS1O43638 330 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PRAMEF4O60810 478 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 SIX3O95343 332 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-212ENST00000489728 MED26O95402 600 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 OTCP00480 354 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PROCP04070 461 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ALOX12P18054 663 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 CD22P20273 847 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF10P21506 573 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ARFIP1P53367 373 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PRKAA2P54646 552 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PHEXP78562 749 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 OCA2Q04671 838 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF844Q08AG5 666 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 SSPNQ14714 243 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ADPRMQ3LIE5 342 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 GGTA1PQ4G0N0 100 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 FBXO48Q5FWF7 155 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PRAMEF9Q5VWM5 478 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 C19orf48Q6RUI8 117 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ZYG11AQ6WRX3 759 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 HOMEZQ8IX15 550 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 AMER3Q8N944 861 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 SRFBP1Q8NEF9 429 aaKnown RBP10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ADAMTS17Q8TE56 1095 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF483Q8TF39 744 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-212ENST00000489728 GAL3ST3Q96A11 431 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 COL26A1Q96A83 441 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PHF21BQ96EK2 531 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 MMABQ96EY8 250 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-212ENST00000489728 APOPT1Q96IL0 206 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 VPS50Q96JG6 964 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 IQCGQ9H095 443 aaKnown RBP10.52□□□□□ -0.73
CPSF7-212ENST00000489728 IPPKQ9H8X2 491 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 ACTR8Q9H981 624 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PSD3Q9NYI0 1048 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 PPT2Q9UMR5 302 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 POLHQ9Y253 713 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 CACNA1BQ00975 2339 aa10.52□□□□□ -0.73
CPSF7-212ENST00000489728 LOC400499M0QZD8 3231 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 A0A0A6YYC8 382 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 I3L1I5 382 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 CTIFO43310 598 aaKnown RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 PLIN3O60664 434 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 GALR3O60755 368 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 CLDN9O95484 217 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 MLYCDO95822 493 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 SMIM10L1P0DMW3 83 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 MYL2P10916 166 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 IMPDH1P20839 514 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 PIK3CBP42338 1070 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 TSFMP43897 325 aaKnown RBP10.51□□□□□ -0.73
CPSF7-212ENST00000489728 OR1D4P47884 311 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 CCNG1P51959 295 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 DNAJB13P59910 316 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 TGM3Q08188 693 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 NKG7Q16617 165 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 KRT71Q3SY84 523 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 TMEM35AQ53FP2 167 aa10.51□□□□□ -0.73
CPSF7-212ENST00000489728 ZNF678Q5SXM1 525 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms