RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 NIPAL1Q6NVV3 410 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 RPUSD3Q6P087 351 aaKnown RBP11.85□□□□□ -0.51
SRRM1-216ENST00000489130 CAPN12Q6ZSI9 719 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 LANCL3Q6ZV70 420 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 CYS1Q717R9 158 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 THOC6Q86W42 341 aaKnown RBP11.85□□□□□ -0.51
SRRM1-216ENST00000489130 SIRT6Q8N6T7 355 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 ST6GALNAC3Q8NDV1 305 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 CATSPER1Q8NEC5 780 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 GRHL3Q8TE85 626 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 CDKL2Q92772 493 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 HAS2Q92819 552 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 TSNARE1Q96NA8 513 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 OR1F2PQ96R84 312 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 PHACTR1Q9C0D0 580 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 RNF32Q9H0A6 362 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 PELI2Q9HAT8 420 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 LRRC4CQ9HCJ2 640 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 SAYSD1Q9NPB0 183 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 ZFP69BQ9UJL9 534 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 SLC22A14Q9Y267 594 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 DYRK1BQ9Y463 629 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 KCNE2Q9Y6J6 123 aa11.85□□□□□ -0.51
SRRM1-216ENST00000489130 TRAV17A0A0B4J275 112 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 TCRBV9S1A1TA0A576 114 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 ZNF860A6NHJ4 632 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 CXorf49A8MYA2 514 aaPredicted RBP11.84□□□□□ -0.51
SRRM1-216ENST00000489130 E2F3O00716 465 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 GALR3O60755 368 aaPredicted RBP11.84□□□□□ -0.51
SRRM1-216ENST00000489130 WFS1O76024 890 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 C1QAP02745 245 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 RNF224P0DH78 156 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 ALOX12P18054 663 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 SLC6A12P48065 614 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 TNFSF10P50591 281 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 ETF1P62495 437 aaKnown RBP11.84□□□□□ -0.51
SRRM1-216ENST00000489130 SKP1P63208 163 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 POU4F1Q01851 419 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 RHAGQ02094 409 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 C2orf54Q08AI8 447 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 NXPE4Q6UWF7 544 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 ABHD13Q7L211 337 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 CPEB2Q7Z5Q1 589 aaKnown RBP11.84□□□□□ -0.51
SRRM1-216ENST00000489130 ANKRD37Q7Z713 158 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 KLHDC8AQ8IYD2 350 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 ANKRD53Q8N9V6 530 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 PLPP5Q8NEB5 264 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 OR5T3Q8NGG3 340 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 FAR1Q8WVX9 515 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 PEX11GQ96HA9 241 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 CPNE1Q99829 537 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 EGFL8Q99944 293 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 AIF1LQ9BQI0 150 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 DERL2Q9GZP9 239 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 LANCL2Q9NS86 450 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 CTNNAL1Q9UBT7 734 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 MTO1Q9Y2Z2 717 aaKnown RBP11.84□□□□□ -0.51
SRRM1-216ENST00000489130 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
SRRM1-216ENST00000489130 NBPF19A0A087WUL8 3843 aa11.84□□□□□ -0.51
SRRM1-216ENST00000489130 USP9YO00507 2555 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 IGHV3-20A0A0C4DH32 117 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 OR2W5A6NFC9 320 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 WIPF3A6NGB9 483 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 FAM159BA6NKW6 160 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 SEC24DO94855 1032 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 DDAH2O95865 285 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 SERPIND1P05546 499 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 FHP07954 510 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 GSTA2P09210 222 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 ZNF888P0CJ79 500 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 CASQ1P31415 396 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 SLC12A2P55011 1212 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 HYAL2Q12891 473 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 ELOAQ14241 798 aaKnown RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 ABRAXAS2Q15018 415 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 TGFBIQ15582 683 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 ZKSCAN8Q15776 578 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 INAQ16352 499 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 BTBD16Q32M84 506 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 DEFB134Q4QY38 66 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 FAM180AQ6UWF9 173 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 C3orf62Q6ZUJ4 267 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 FRA10AC1Q70Z53 315 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 ZNF572Q7Z3I7 529 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 CTAGE6Q86UF2 777 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 C17orf53Q8N3J3 647 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 AMER2Q8N7J2 671 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 TRPV3Q8NET8 790 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 OR1N1Q8NGS0 311 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 UTP15Q8TED0 518 aaKnown RBP11.83□□□□□ -0.52
SRRM1-216ENST00000489130 TBC1D20Q96BZ9 403 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 RHBDF1Q96CC6 855 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 TSPAN17Q96FV3 270 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 GPR22Q99680 433 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 RBBP8Q99708 897 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 SLX1AQ9BQ83 275 aa11.83□□□□□ -0.52
SRRM1-216ENST00000489130 RBCK1Q9BYM8 510 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms