RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 LRP4O75096 1905 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 A0A1W2PP18 115 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 TLCD2A6NGC4 264 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 PLPP1O14494 284 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 CAPN5O15484 640 aaPredicted RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 MAP3K7O43318 606 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 ERI3O43414 337 aaKnown RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 AKAP10O43572 662 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 EEDO75530 441 aaKnown RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 LRATO95237 230 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 STATHP02808 62 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 IL6P05231 212 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 KLK1P06870 262 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 COX7A2P14406 83 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 HOXB3P14651 431 aaPredicted RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 CD1EP15812 388 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 ITGAXP20702 1163 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 TACR1P25103 407 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 IL12AP29459 219 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 S100A3P33764 101 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 RPL3P39023 403 aaKnown RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 GPR3P46089 330 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 MAPK12P53778 367 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 PLA2G16P53816 162 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 PPP1CAP62136 330 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 RAE1P78406 368 aaKnown RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 SLC25A3Q00325 362 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 RELAQ04206 551 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 PWP1Q13610 501 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 NFYCQ13952 458 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 DPY19L1Q2PZI1 675 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 HKDC1Q2TB90 917 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 PGS1Q32NB8 556 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 INAVAQ3KP66 663 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 FAM174BQ3ZCQ3 159 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 CCNYL2Q5T2Q4 361 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 FCRL6Q6DN72 434 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 TRIM40Q6P9F5 258 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 BNC2Q6ZN30 1099 aaPredicted RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 ZNF438Q7Z4V0 828 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 DEFB107AQ8IZN7 70 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 DSELQ8IZU8 1212 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 ZNF655Q8N720 491 aaPredicted RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 Q8N9G6 341 aaPredicted RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 C19orf47Q8N9M1 422 aaKnown RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 SRFBP1Q8NEF9 429 aaKnown RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 OR6C4Q8NGE1 309 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 FBXO27Q8NI29 283 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 WDR48Q8TAF3 677 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 CREB3L4Q8TEY5 395 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 SLC13A3Q8WWT9 602 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 NCSTNQ92542 709 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 VPS33AQ96AX1 596 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 TESCQ96BS2 214 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 ROPN1LQ96C74 230 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 TGM7Q96PF1 710 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 KCNC2Q96PR1 638 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 CD180Q99467 661 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 NLNQ9BYT8 704 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 ABCG4Q9H172 646 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 CLMPQ9H6B4 373 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 COPS7BQ9H9Q2 264 aaPredicted RBP9.57□□□□□ -0.88
USP11-211ENST00000489111 WDR41Q9HAD4 459 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 IL21RQ9HBE5 538 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 EVA1BQ9NVM1 165 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 GID8Q9NWU2 228 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 R4GN57 208 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 DOCK9Q9BZ29 2069 aa9.57□□□□□ -0.88
USP11-211ENST00000489111 ZDBF2Q9HCK1 2354 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 IGHV1OR21-1A0A087WYE8 117 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 A0A0J9YVX5 310 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 LRIT2A6NDA9 550 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 URADA6NGE7 173 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 PRR33A8MZF0 331 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 TRIM38O00635 465 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 FBP2O00757 339 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 KHNYNO15037 678 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 SCAMP2O15127 329 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 GSC2O15499 205 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 CTSVO60911 334 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 CIB2O75838 187 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 RASSF9O75901 435 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 GBAP04062 536 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 ST6GAL1P15907 406 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 DDX5P17844 614 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 HNRNPH1P31943 449 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 CPOXP36551 454 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 MLLT3P42568 568 aaPredicted RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 KIR3DL1P43629 444 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 LSSP48449 732 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 ARL4DP49703 201 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 DGKQP52824 942 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 OR1D5P58170 312 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 C21orf58P58505 322 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 GPLD1P80108 840 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 ZIC1Q15915 447 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 TRMT5Q32P41 509 aaKnown RBP9.56□□□□□ -0.88
USP11-211ENST00000489111 AMZ1Q400G9 498 aa9.56□□□□□ -0.88
USP11-211ENST00000489111 SPANXN4Q5MJ08 99 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms