RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ACTN3Q08043 901 aaPredicted RBP11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 PWP1Q13610 501 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 HERC3Q15034 1050 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 BTBD16Q32M84 506 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 C18orf21Q32NC0 220 aaPredicted RBP11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 DEFB134Q4QY38 66 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 ANKRD37Q7Z713 158 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 CTAGE6Q86UF2 777 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 AFAP1L2Q8N4X5 818 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 TBC1D19Q8N5T2 526 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 BBOF1Q8ND07 529 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 ST6GALNAC3Q8NDV1 305 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 SPATA4Q8NEY3 305 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 PYROXD1Q8WU10 500 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 EGFL8Q99944 293 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 ERP44Q9BS26 406 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 SARGQ9BW04 601 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 UNKQ9C0B0 810 aaKnown RBP11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 SAYSD1Q9NPB0 183 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 CTNNAL1Q9UBT7 734 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 C19orf25Q9UFG5 118 aaPredicted RBP11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC5A6Q9Y289 635 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 MTO1Q9Y2Z2 717 aaKnown RBP11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 DYRK1BQ9Y463 629 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 ESPL1Q14674 2120 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 TRAV17A0A0B4J275 112 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 FAM187AA6NFU0 413 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 CXorf49A8MYA2 514 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 RAD51CO43502 376 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 CHST10O43529 356 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 GALR3O60755 368 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ZNF888P0CJ79 500 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ALOX12P18054 663 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 SSTR1P30872 391 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 GDF5P43026 501 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 SCTRP47872 440 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC12A2P55011 1212 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 AP2B1P63010 937 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 RHAGQ02094 409 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ZNF33BQ06732 778 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 RGS1Q08116 209 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 C2orf54Q08AI8 447 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 CALCOCO2Q13137 446 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 CBLBQ13191 982 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ABRAXAS2Q15018 415 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 RBBP5Q15291 538 aaKnown RBP11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 TSNQ15631 228 aaKnown RBP11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 NSDHLQ15738 373 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ABHD17BQ5VST6 288 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 FCRLBQ6BAA4 426 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 PLAG1Q6DJT9 500 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 RPUSD3Q6P087 351 aaKnown RBP11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 NXPE4Q6UWF7 544 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 FAM180AQ6UWF9 173 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 C17orf53Q8N3J3 647 aaPredicted RBP11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 SPATA6LQ8N4H0 392 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ANKRD53Q8N9V6 530 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 NT5CQ8TCD5 201 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ANKRD7Q92527 254 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 VPS39Q96JC1 886 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 AIF1LQ9BQI0 150 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 MCMBPQ9BTE3 642 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 RHOJQ9H4E5 214 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 CAB39LQ9H9S4 337 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 GPAMQ9HCL2 828 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 LANCL2Q9NS86 450 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 NSMCE4AQ9NXX6 385 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 OSGIN2Q9Y236 505 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 OARD1Q9Y530 152 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 KCNE2Q9Y6J6 123 aa11.25□□□□□ -0.61
CCHCR1-215ENST00000488920 WIPF3A6NGB9 483 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 NCF1BA6NI72 391 aaPredicted RBP11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 NCF1CA8MVU1 366 aaPredicted RBP11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 E2F3O00716 465 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 NDC80O14777 642 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 B4GALT2O60909 372 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 LDLRP01130 860 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 CYC1P08574 325 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 EDN3P14138 238 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 NCF1P14598 390 aaPredicted RBP11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 IL10P22301 178 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 AHRP35869 848 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 AGTR2P50052 363 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 ST13P50502 369 aaKnown RBP11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 RAB8AP61006 207 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 CDKL1Q00532 357 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 REEP5Q00765 189 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 SRSF11Q05519 484 aaKnown RBP11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 SFT2D3Q587I9 215 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 C3orf62Q6ZUJ4 267 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 FRA10AC1Q70Z53 315 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 ABHD13Q7L211 337 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 MAATS1Q7Z4T9 603 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 TMPRSS11BQ86T26 416 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 BCORP1Q8N888 145 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 PLPP5Q8NEB5 264 aa11.24□□□□□ -0.61
CCHCR1-215ENST00000488920 UTP15Q8TED0 518 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms