RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 HORMAD2Q8N7B1 307 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 ACRBPQ8NEB7 543 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 ASB11Q8WXH4 323 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 PEX11GQ96HA9 241 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 OR1F2PQ96R84 312 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 KIFC1Q9BW19 673 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 GSX1Q9H4S2 264 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-228ENST00000487354 EIF2B3Q9NR50 452 aaKnown RBP14.38□□□□□ -0.11
MCF2L-228ENST00000487354 TMEM184CQ9NVA4 438 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 SYBUQ9NX95 663 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 KCNN3Q9UGI6 736 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 AMFRQ9UKV5 643 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 NAALAD2Q9Y3Q0 740 aa14.38□□□□□ -0.11
MCF2L-228ENST00000487354 EPN1Q9Y6I3 576 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-228ENST00000487354 ARHGAP21Q5T5U3 1957 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 FEZF1A0PJY2 475 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 FOXO6A8MYZ6 492 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 H3BMM5 538 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 GFYI3L273 518 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 CDK2AP1O14519 115 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 HS6ST1O60243 411 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 LCMT2O60294 686 aaKnown RBP14.37□□□□□ -0.11
MCF2L-228ENST00000487354 CHRM3P20309 590 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 CYLC1P35663 651 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-228ENST00000487354 CYB561P49447 251 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 NAP1L1P55209 391 aaKnown RBP14.37□□□□□ -0.11
MCF2L-228ENST00000487354 TBPL1P62380 186 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 CUL1Q13616 776 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 RPS6KA1Q15418 735 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 CYHR1Q6ZMK1 362 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 PEX26Q7Z412 305 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 SULF2Q8IWU5 870 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 NFAM1Q8NET5 270 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-228ENST00000487354 C16orf52Q8NHV5 167 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 C1orf54Q8WWF1 131 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 ASB5Q8WWX0 329 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 HES6Q96HZ4 224 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 SEC16BQ96JE7 1060 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 EBNA1BP2Q99848 306 aaKnown RBP14.37□□□□□ -0.11
MCF2L-228ENST00000487354 ZNF559Q9BR84 538 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 IL22Q9GZX6 179 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 LIME1Q9H400 295 aa14.37□□□□□ -0.11
MCF2L-228ENST00000487354 ZNF839A8K0R7 811 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 TFECO14948 347 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 B3GALT4O96024 378 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 KLK2P20151 261 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 MGAT1P26572 445 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 RPL22P35268 128 aaKnown RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 HLCSP50747 726 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 NUP107P57740 925 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 OR4D2P58180 307 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 TAS2R50P59544 299 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 MPP1Q00013 466 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 KCTD19Q17RG1 926 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 RNF187Q5TA31 235 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 ZNF549Q6P9A3 640 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 SLC26A11Q86WA9 606 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 OTUD6BQ8N6M0 293 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 UBL4BQ8N7F7 174 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 PRELID2Q8N945 189 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 ZFP62Q8NB50 900 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 POGLUT1Q8NBL1 392 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 OR52N2Q8NGI0 321 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 MCOLN3Q8TDD5 553 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 THAP11Q96EK4 314 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 ANKHQ9HCJ1 492 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 CCM2LQ9NUG4 571 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 ZNF358Q9NW07 568 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 RPH3AQ9Y2J0 694 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-228ENST00000487354 SLC22A7Q9Y694 548 aa14.36□□□□□ -0.11
MCF2L-228ENST00000487354 IGKV3D-11A0A0A0MRZ8 115 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 SAGE2PA6NJ88 616 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 KLK8O60259 260 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 SYF2O95926 243 aaKnown RBP14.35□□□□□ -0.11
MCF2L-228ENST00000487354 FHP07954 510 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 OGNP20774 298 aaKnown RBP14.35□□□□□ -0.11
MCF2L-228ENST00000487354 DLX5P56178 289 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 OLR1P78380 273 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 ACTN3Q08043 901 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-228ENST00000487354 FOXD4Q12950 439 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-228ENST00000487354 SIX1Q15475 284 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-228ENST00000487354 MRNIPQ6NTE8 343 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 MDGA2Q7Z553 956 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 ASPGQ86U10 573 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 CILP2Q8IUL8 1156 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 ZNF740Q8NDX6 193 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 RND1Q92730 232 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 NINJ1Q92982 152 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 TCF12Q99081 682 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 TP63Q9H3D4 680 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-228ENST00000487354 DEPPQ9NTK1 212 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 PAK5Q9P286 719 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 SOX13Q9UN79 622 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 L3MBTL1Q9Y468 752 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 NCKAP5O14513 1909 aa14.35□□□□□ -0.11
MCF2L-228ENST00000487354 TCRBV7S3A2A0A539 114 aa14.34□□□□□ -0.11
MCF2L-228ENST00000487354 PINLYPA6NC86 204 aa14.34□□□□□ -0.11
MCF2L-228ENST00000487354 PEX1O43933 1283 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms