RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MED13LQ71F56 2210 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 FEZF1A0PJY2 475 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 ZNF860A6NHJ4 632 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 MAGEB17A8MXT2 336 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 FANCGO15287 622 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 ENO3P13929 434 aaPredicted RBP18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 TPSB2P20231 275 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 OR4D2P58180 307 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 TPSAB1Q15661 275 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 ZNF470Q6ECI4 717 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 ZNF549Q6P9A3 640 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 DRICH1Q6PGQ1 229 aaPredicted RBP18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 UBE2R2Q712K3 238 aaPredicted RBP18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 PIWIL4Q7Z3Z4 852 aaKnown RBP18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 SLC26A11Q86WA9 606 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 RPS19BP1Q86WX3 136 aaKnown RBP18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 EID3Q8N140 333 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 KIF2BQ8N4N8 673 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 RNF10Q8N5U6 811 aaKnown RBP18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 OR5T3Q8NGG3 340 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 ELP5Q8TE02 316 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 KCNJ9Q92806 393 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 OR1F2PQ96R84 312 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 TSGA10Q9BZW7 698 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 COQ3Q9NZJ6 369 aa18.26■□□□□ 0.51
SMPDL3A-202ENST00000487215 CDK2AP1O14519 115 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 LCMT2O60294 686 aaKnown RBP18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 AVILO75366 819 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 PAMP19021 973 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 IL10P22301 178 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 TPP2P29144 1249 aaPredicted RBP18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 PTGER1P34995 402 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 CDK16Q00536 496 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 KRTAP21-3Q3LHN1 58 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 GSTA5Q7RTV2 222 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 ZNF227Q86WZ6 799 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 DENND6AQ8IWF6 608 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 CPNE9Q8IYJ1 553 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 SLC13A3Q8WWT9 602 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 FBXO6Q9NRD1 293 aaPredicted RBP18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 DHRS7Q9Y394 339 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 SLC22A7Q9Y694 548 aa18.25■□□□□ 0.51
SMPDL3A-202ENST00000487215 CTAGE9A4FU28 777 aa18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 CAPN13Q6MZZ7 669 aaPredicted RBP18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 CD200R1Q8TD46 325 aa18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 GPR21Q99679 349 aa18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 PCBD2Q9H0N5 130 aa18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 CCDC68Q9H2F9 335 aa18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 TRIM45Q9H8W5 580 aaPredicted RBP18.24■□□□□ 0.51
SMPDL3A-202ENST00000487215 FHP07954 510 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 SLC35G6P0C7Q6 338 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 IGFBP2P18065 325 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 KCNJ1P48048 391 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 CYB561P49447 251 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 TERF1P54274 439 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 MPP1Q00013 466 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 CTBP1Q13363 440 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 DHX34Q14147 1143 aaKnown RBP18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 CASC4Q6P4E1 433 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 C17orf64Q86WR6 236 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 MARVELD2Q8N4S9 558 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 AFAP1L2Q8N4X5 818 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 MFSD9Q8NBP5 474 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 FAM57AQ8TBR7 257 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 ZNF669Q96BR6 464 aaPredicted RBP18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 TBC1D20Q96BZ9 403 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 FAM129AQ9BZQ8 928 aa18.23■□□□□ 0.51
SMPDL3A-202ENST00000487215 A0A1B0GTH9 108 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 DNAJB6O75190 326 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 TPOP07202 933 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 CDH1P12830 882 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 PTGS2P35354 604 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 ITGA8P53708 1063 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 MLF1P58340 268 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 THOC5Q13769 683 aaKnown RBP18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 HERC3Q15034 1050 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 ARMC3Q5W041 872 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 MBOAT1Q6ZNC8 495 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 CD163Q86VB7 1156 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 ATG10Q9H0Y0 220 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 NPDC1Q9NQX5 325 aaPredicted RBP18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 ADAMTS6Q9UKP5 1117 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 HRH3Q9Y5N1 445 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 SCN3AQ9NY46 2000 aa18.22■□□□□ 0.51
SMPDL3A-202ENST00000487215 TFECO14948 347 aaPredicted RBP18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 GALR3O60755 368 aaPredicted RBP18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 CD1EP15812 388 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 JAK1P23458 1154 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 CDC25BP30305 580 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 TRHRP34981 398 aaPredicted RBP18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 GRK3P35626 688 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 SLC1A2P43004 574 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 MEOX1P50221 254 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 HLCSP50747 726 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 OLR1P78380 273 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 AGTRAPQ6RW13 159 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 CEP128Q6ZU80 1094 aa18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 CAND1Q86VP6 1230 aaKnown RBP18.21■□□□□ 0.51
SMPDL3A-202ENST00000487215 POGLUT1Q8NBL1 392 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms