RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 MED4Q9NPJ6 270 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 INTS9Q9NV88 658 aaKnown RBP5.39□□□□□ -1.55
COPS3-208ENST00000486032 TMEM184CQ9NVA4 438 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 OXSMQ9NWU1 459 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 SLC39A1Q9NY26 324 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 EPHA6Q9UF33 1036 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 SNX7Q9UNH6 387 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 SATB2Q9UPW6 733 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 RNF11Q9Y3C5 154 aa5.39□□□□□ -1.55
COPS3-208ENST00000486032 MN1Q10571 1320 aaPredicted RBP5.39□□□□□ -1.55
COPS3-208ENST00000486032 SNRNP200O75643 2136 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 CCDC187A0A096LP49 1063 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 LOC105369274A0A096LPK9 316 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 LOC102723532A0A0G2JNH3 316 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 A0A1B0GTL3 188 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 A0A1W2PNU3 283 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 ANKDD1BA6NHY2 528 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 H0YGG7 62 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 TMX2-CTNND1H3BSU7 103 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 OR7A17O14581 309 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 POLR3GO15318 223 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 ITM2AO43736 263 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 LCMT2O60294 686 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 PRAMEF4O60810 478 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CTSVO60911 334 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 DKK1O94907 266 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CLDN9O95484 217 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CHRNGP07510 517 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CTSBP07858 339 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 C1QTNF9P0C862 333 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 KITP10721 976 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CDK4P11802 303 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 NELFEP18615 380 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 EPORP19235 508 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 SERPINB3P29508 390 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 HMOX2P30519 316 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 BCL6P41182 706 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 NEK2P51955 445 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 DNAJB13P59910 316 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ERVPABLB-1P60509 514 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ARF3P61204 181 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 ABCE1P61221 599 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 HSD11B2P80365 405 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 NFKB2Q00653 900 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 REEP5Q00765 189 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ACY1Q03154 408 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ZFP36L1Q07352 338 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 SF3A3Q12874 501 aaKnown RBP eCLIP5.38□□□□□ -1.55
COPS3-208ENST00000486032 STX3Q13277 289 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 SQSTM1Q13501 440 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 TUBB3Q13509 450 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 TRA2AQ13595 282 aaKnown RBP eCLIP5.38□□□□□ -1.55
COPS3-208ENST00000486032 NAA25Q14CX7 972 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CLPPQ16740 277 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 ZC3H12BQ5HYM0 836 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 PAGE2BQ5JRK9 111 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 TCHHL1Q5QJ38 904 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 PRAMEF17Q5VTA0 474 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CDCP2Q5VXM1 449 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ATG9BQ674R7 924 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 FRMPD2BQ6IN97 320 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ADNP2Q6IQ32 1131 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 MED27Q6P2C8 311 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 FBXO42Q6P3S6 717 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 GPRIN3Q6ZVF9 776 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ARHGAP22Q7Z5H3 698 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 SYVN1Q86TM6 617 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 TMPRSS12Q86WS5 348 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 MCATQ8IVS2 390 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 KLHDC8AQ8IYD2 350 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 OR4N4Q8N0Y3 316 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 KRT78Q8N1N4 520 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 GALNT15Q8N3T1 639 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 RNF175Q8N4F7 328 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 DNAJC22Q8N4W6 341 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 TBC1D19Q8N5T2 526 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ARFGAP2Q8N6H7 521 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ZNF655Q8N720 491 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 CDYL2Q8N8U2 506 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 AGBL5Q8NDL9 886 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 FAM76AQ8TAV0 307 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ZCCHC10Q8TBK6 192 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ADAMTS14Q8WXS8 1223 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 KLHL6Q8WZ60 621 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 RERGQ96A58 199 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 ZUFSPQ96AP4 578 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 L3HYPDHQ96EM0 354 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 PTCD3Q96EY7 689 aaKnown RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 TCTN2Q96GX1 697 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 SLC41A2Q96JW4 573 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 PPP1R36Q96LQ0 422 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 KCNA7Q96RP8 456 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 HBEGFQ99075 208 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 ZFYVE21Q9BQ24 234 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 CAPS2Q9BXY5 557 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 SPRTNQ9H040 489 aaPredicted RBP5.38□□□□□ -1.55
COPS3-208ENST00000486032 RAB33BQ9H082 229 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 FANCEQ9HB96 536 aa5.38□□□□□ -1.55
COPS3-208ENST00000486032 APMAPQ9HDC9 416 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms