RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ABHD2P08910 425 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CD63P08962 238 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 SMIM10L1P0DMW3 83 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CYP2A7P20853 494 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 TNFRSF8P28908 595 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CMPK1P30085 196 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 STX2P32856 288 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 SPRP35270 261 aaPredicted RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 CD97P48960 835 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ARL4DP49703 201 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 HNMTP50135 292 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 RAB10P61026 200 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ARF3P61204 181 aaPredicted RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 ATP6V0D1P61421 351 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 DCDP81605 110 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 CDC20Q12834 499 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CHAF1BQ13112 559 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 SSPNQ14714 243 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 GRM7Q14831 915 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 SLC9A5Q14940 896 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 TGFBIQ15582 683 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 HKDC1Q2TB90 917 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 FAM214AQ32MH5 1076 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 WASHC2DQ5SRD0 308 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ATG14Q6ZNE5 492 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CEP128Q6ZU80 1094 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 C8orf86Q6ZUL3 223 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 SH2D5Q6ZV89 423 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 OVCH1Q7RTY7 1134 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ADAMTSL2Q86TH1 951 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 PDSS2Q86YH6 399 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 MYO1HQ8N1T3 1032 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 PLD6Q8N2A8 252 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 METTL27Q8N6F8 245 aaPredicted RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 AMER3Q8N944 861 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 GPATCH11Q8N954 259 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 OR2Y1Q8NGV0 311 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 RHEBL1Q8TAI7 183 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 SLC44A1Q8WWI5 657 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ATL1Q8WXF7 558 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.44□□□□□ -1.54
CUX1-208ENST00000485792 STARD8Q92502 1023 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 PHF3Q92576 2039 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 CDKL2Q92772 493 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 EXTL1Q92935 676 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ESAMQ96AP7 390 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 PYCR2Q96C36 320 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 MED8Q96G25 268 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 SMIM10Q96HG1 83 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CYTH2Q99418 400 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 FMO2Q99518 471 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ACAT2Q9BWD1 397 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 EHD1Q9H4M9 534 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ACTL8Q9H568 366 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ANKZF1Q9H8Y5 726 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 FANCEQ9HB96 536 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 MRPS30Q9NP92 439 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 PPANQ9NQ55 473 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 SOHLH2Q9NX45 425 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CTNNAL1Q9UBT7 734 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CTSFQ9UBX1 484 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 TAC3Q9UHF0 121 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ZNF180Q9UJW8 692 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 CLDN16Q9Y5I7 305 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 ASH1LQ9NR48 2969 aaKnown RBP5.44□□□□□ -1.54
CUX1-208ENST00000485792 MYO7BQ6PIF6 2116 aa5.44□□□□□ -1.54
CUX1-208ENST00000485792 NCOA6Q14686 2063 aaPredicted RBP5.43□□□□□ -1.54
CUX1-208ENST00000485792 HYKKA2RU49 373 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 OR2W5A6NFC9 320 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 H7BY64 318 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 TXNDC9O14530 226 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 CCNDBP1O95273 360 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 SHBGP04278 402 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 CYC1P08574 325 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 FAM87AP0C7U9 286 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 CCDC166P0CW27 439 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 NID1P14543 1247 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 STMN1P16949 149 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 CRABP2P29373 138 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 RPA3P35244 121 aaPredicted RBP5.43□□□□□ -1.54
CUX1-208ENST00000485792 AHRP35869 848 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 BCL6P41182 706 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 GDF5P43026 501 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 PMS2P54278 862 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 VSX2P58304 361 aaPredicted RBP5.43□□□□□ -1.54
CUX1-208ENST00000485792 RPS15AP62244 130 aaKnown RBP5.43□□□□□ -1.54
CUX1-208ENST00000485792 MEF2AQ02078 507 aaPredicted RBP5.43□□□□□ -1.54
CUX1-208ENST00000485792 Q0VFX4 171 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 NAE1Q13564 534 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 RASA2Q15283 850 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 TSNQ15631 228 aaKnown RBP5.43□□□□□ -1.54
CUX1-208ENST00000485792 TBCCQ15814 346 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 NKG7Q16617 165 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 SYT16Q17RD7 645 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 ADPRMQ3LIE5 342 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 NKAIN1Q4KMZ8 207 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 CATSPEREQ5SY80 951 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 C1orf189Q5VU69 101 aa5.43□□□□□ -1.54
CUX1-208ENST00000485792 PRAMEF13Q5VWM6 474 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms