RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PTX3P26022 381 aaPredicted RBP15.09■□□□□ 0.01
APOE-205ENST00000485628 SEC24CP53992 1094 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 RPS13P62277 151 aaKnown RBP15.09■□□□□ 0.01
APOE-205ENST00000485628 GNGT1P63211 74 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 ACY1Q03154 408 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 TBL3Q12788 808 aaKnown RBP15.09■□□□□ 0.01
APOE-205ENST00000485628 IL11RAQ14626 422 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 GPR19Q15760 415 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 DEFB110Q30KQ9 67 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 WASHC2DQ5SRD0 308 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 TMTC4Q5T4D3 741 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 TMEM214Q6NUQ4 689 aaKnown RBP15.09■□□□□ 0.01
APOE-205ENST00000485628 EPGNQ6UW88 154 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 CAMKVQ8NCB2 501 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 OR1L3Q8NH93 324 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 AGR3Q8TD06 166 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 MTFMTQ96DP5 389 aaKnown RBP15.09■□□□□ 0.01
APOE-205ENST00000485628 MS4A6EQ96DS6 147 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 FAM122AQ96E09 287 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 CMTM7Q96FZ5 175 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 METTL2AQ96IZ6 378 aaKnown RBP15.09■□□□□ 0.01
APOE-205ENST00000485628 FCRL1Q96LA6 429 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 KLHL31Q9H511 634 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 SYNDIG1Q9H7V2 258 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 SOHLH2Q9NX45 425 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 WASF3Q9UPY6 502 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 USH1CQ9Y6N9 552 aa15.09■□□□□ 0.01
APOE-205ENST00000485628 DCDC2BA2VCK2 349 aa15.08■□□□□ 0
APOE-205ENST00000485628 C4orf51C9J302 202 aa15.08■□□□□ 0
APOE-205ENST00000485628 TXNDC9O14530 226 aa15.08■□□□□ 0
APOE-205ENST00000485628 LSM1O15116 133 aaKnown RBP15.08■□□□□ 0
APOE-205ENST00000485628 ZSCAN9O15535 394 aaPredicted RBP15.08■□□□□ 0
APOE-205ENST00000485628 HYAL3O43820 417 aaPredicted RBP15.08■□□□□ 0
APOE-205ENST00000485628 KLHL18O94889 574 aa15.08■□□□□ 0
APOE-205ENST00000485628 SEMA3DO95025 777 aa15.08■□□□□ 0
APOE-205ENST00000485628 CCL4P13236 92 aa15.08■□□□□ 0
APOE-205ENST00000485628 CSTF2P33240 577 aaKnown RBP eCLIP15.08■□□□□ 0
APOE-205ENST00000485628 ARL1P40616 181 aaPredicted RBP15.08■□□□□ 0
APOE-205ENST00000485628 PPM1FP49593 454 aaPredicted RBP15.08■□□□□ 0
APOE-205ENST00000485628 VSX2P58304 361 aaPredicted RBP15.08■□□□□ 0
APOE-205ENST00000485628 EIF3IQ13347 325 aaKnown RBP15.08■□□□□ 0
APOE-205ENST00000485628 HKDC1Q2TB90 917 aa15.08■□□□□ 0
APOE-205ENST00000485628 GARNL3Q5VVW2 1013 aa15.08■□□□□ 0
APOE-205ENST00000485628 KHDRBS2Q5VWX1 349 aaKnown RBP15.08■□□□□ 0
APOE-205ENST00000485628 LARP4Q71RC2 724 aaKnown RBP eCLIP15.08■□□□□ 04e-53■□□□□ 8.2
APOE-205ENST00000485628 KCT2Q8NC54 265 aa15.08■□□□□ 0
APOE-205ENST00000485628 CHTF18Q8WVB6 975 aa15.08■□□□□ 0
APOE-205ENST00000485628 C10orf90Q96M02 699 aa15.08■□□□□ 0
APOE-205ENST00000485628 QRFPRQ96P65 431 aa15.08■□□□□ 0
APOE-205ENST00000485628 MACROD1Q9BQ69 325 aa15.08■□□□□ 0
APOE-205ENST00000485628 SPRY4Q9C004 299 aa15.08■□□□□ 0
APOE-205ENST00000485628 SPRTNQ9H040 489 aaPredicted RBP15.08■□□□□ 0
APOE-205ENST00000485628 MARCOQ9UEW3 520 aaPredicted RBP15.08■□□□□ 0
APOE-205ENST00000485628 RUVBL1Q9Y265 456 aaKnown RBP15.08■□□□□ 0
APOE-205ENST00000485628 SLC22A7Q9Y694 548 aa15.08■□□□□ 0
APOE-205ENST00000485628 FER1L5A0AVI2 2057 aa15.08■□□□□ 0
APOE-205ENST00000485628 TMEM150CB9EJG8 249 aa15.07■□□□□ 0
APOE-205ENST00000485628 SLC28A1O00337 649 aa15.07■□□□□ 0
APOE-205ENST00000485628 MAP3K7O43318 606 aa15.07■□□□□ 0
APOE-205ENST00000485628 RSL1D1O76021 490 aaKnown RBP15.07■□□□□ 0
APOE-205ENST00000485628 SCELO95171 688 aa15.07■□□□□ 0
APOE-205ENST00000485628 ONECUT2O95948 504 aa15.07■□□□□ 0
APOE-205ENST00000485628 CHEK2O96017 543 aa15.07■□□□□ 0
APOE-205ENST00000485628 TGFB1P01137 390 aa15.07■□□□□ 0
APOE-205ENST00000485628 VIMP08670 466 aaKnown RBP15.07■□□□□ 0
APOE-205ENST00000485628 LINC00032P0C843 101 aa15.07■□□□□ 0
APOE-205ENST00000485628 KITP10721 976 aa15.07■□□□□ 0
APOE-205ENST00000485628 PCNAP12004 261 aa15.07■□□□□ 0
APOE-205ENST00000485628 ITGA1P56199 1179 aa15.07■□□□□ 0
APOE-205ENST00000485628 CYP4F2P78329 520 aa15.07■□□□□ 0
APOE-205ENST00000485628 FAM53BQ14153 422 aa15.07■□□□□ 0
APOE-205ENST00000485628 SMU1Q2TAY7 513 aa15.07■□□□□ 0
APOE-205ENST00000485628 TMEM35AQ53FP2 167 aa15.07■□□□□ 0
APOE-205ENST00000485628 CCDC157Q569K6 752 aa15.07■□□□□ 0
APOE-205ENST00000485628 GALNT18Q6P9A2 607 aa15.07■□□□□ 0
APOE-205ENST00000485628 TLDC1Q6P9B6 456 aa15.07■□□□□ 0
APOE-205ENST00000485628 SCIMPQ6UWF3 145 aa15.07■□□□□ 0
APOE-205ENST00000485628 METTL4Q8N3J2 472 aa15.07■□□□□ 0
APOE-205ENST00000485628 CSNK1A1LQ8N752 337 aa15.07■□□□□ 0
APOE-205ENST00000485628 OR2L5Q8NG80 312 aa15.07■□□□□ 0
APOE-205ENST00000485628 UTP15Q8TED0 518 aaKnown RBP15.07■□□□□ 0
APOE-205ENST00000485628 RERGQ96A58 199 aaPredicted RBP15.07■□□□□ 0
APOE-205ENST00000485628 C19orf60Q96EN9 201 aa15.07■□□□□ 0
APOE-205ENST00000485628 OR6C1Q96RD1 312 aa15.07■□□□□ 0
APOE-205ENST00000485628 F2RL3Q96RI0 385 aa15.07■□□□□ 0
APOE-205ENST00000485628 HBEGFQ99075 208 aa15.07■□□□□ 0
APOE-205ENST00000485628 SERPINI1Q99574 410 aa15.07■□□□□ 0
APOE-205ENST00000485628 CMKLR1Q99788 373 aa15.07■□□□□ 0
APOE-205ENST00000485628 SIKE1Q9BRV8 207 aa15.07■□□□□ 0
APOE-205ENST00000485628 NUF2Q9BZD4 464 aa15.07■□□□□ 0
APOE-205ENST00000485628 B3GNT4Q9C0J1 378 aa15.07■□□□□ 0
APOE-205ENST00000485628 STRADBQ9C0K7 418 aa15.07■□□□□ 0
APOE-205ENST00000485628 ZMYND15Q9H091 742 aa15.07■□□□□ 0
APOE-205ENST00000485628 EPN3Q9H201 632 aa15.07■□□□□ 0
APOE-205ENST00000485628 OR51B5Q9H339 312 aa15.07■□□□□ 0
APOE-205ENST00000485628 APMAPQ9HDC9 416 aa15.07■□□□□ 0
APOE-205ENST00000485628 PRDM7Q9NQW5 492 aa15.07■□□□□ 0
APOE-205ENST00000485628 VPS29Q9UBQ0 182 aa15.07■□□□□ 0
APOE-205ENST00000485628 SERTAD3Q9UJW9 196 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms