RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ATPAF2Q8N5M1 289 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 TEX26Q8N6G2 289 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 ARL6IP6Q8N6S5 226 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 TEX9Q8N6V9 391 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 NPWQ8N729 165 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 PQLC3Q8N755 202 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 UBL4BQ8N7F7 174 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 SRFBP1Q8NEF9 429 aaKnown RBP5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 TRIM58Q8NG06 486 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 ADAMTS17Q8TE56 1095 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 DUSP19Q8WTR2 217 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 DNASE2BQ8WZ79 361 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 FAM162AQ96A26 154 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 RAB7BQ96AH8 199 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 HDAC11Q96DB2 347 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 TMCO6Q96DC7 493 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 MBD6Q96DN6 1003 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 HES6Q96HZ4 224 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 CELF6Q96J87 481 aaKnown RBP5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 GDAP1L1Q96MZ0 367 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 ZNF641Q96N77 438 aaPredicted RBP5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 DCLRE1CQ96SD1 692 aaKnown RBP5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 VAT1Q99536 393 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 OMDQ99983 421 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 CINPQ9BW66 212 aaPredicted RBP5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 SNTG1Q9NSN8 517 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 ETNK2Q9NVF9 386 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 ADPRHL2Q9NX46 363 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 FBXL12Q9NXK8 326 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 DKK3Q9UBP4 350 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 IL36AQ9UHA7 158 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 MOSPD1Q9UJG1 213 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 HAO1Q9UJM8 370 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 PPP2R2CQ9Y2T4 447 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 APC2O95996 2303 aa5.43□□□□□ -1.54
NHLRC3-205ENST00000485407 ARID1BQ8NFD5 2236 aaPredicted RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 DNHD1Q96M86 4753 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 hCG_1818297A0A087WSY0 165 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 TRAV34A0A0B4J273 112 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 TRBC2A0A5B9 178 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 ARHGAP10A1A4S6 786 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 GOLGA6L9A6NEM1 432 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 HACD1B0YJ81 288 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 C10orf142B7Z368 130 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 J3KR12 359 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 APOC4-APOC2K7ER74 178 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 K7ERQ8 282 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 MID1O15344 667 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 PLRG1O43660 514 aaKnown RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 PRICKLE3O43900 615 aaPredicted RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 CST8O60676 142 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 SEMA7AO75326 666 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 EPN2O95208 641 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 SEMA4FO95754 770 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 PEX11BO96011 259 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 IL1BP01584 269 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 APOC2P02655 101 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 PKMP14618 531 aaKnown RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 HLA-DPA1P20036 260 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 HPDP32754 393 aaPredicted RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 GJC1P36383 396 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 MMP13P45452 471 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 CLK3P49761 638 aaKnown RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 NOVA1P51513 510 aaKnown RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 DNA2P51530 1060 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 PMS2P54278 862 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 RHOAP61586 193 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 AP1S1P61966 158 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 POLR2LP62875 67 aaKnown RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 B4GALNT1Q00973 533 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 XRCC4Q13426 336 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 ZNF235Q14590 738 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 CYTH1Q15438 398 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 KRTCAP3Q53RY4 240 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 BRAT1Q6PJG6 821 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 ERN2Q76MJ5 926 aaKnown RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 CCDC13Q8IYE1 715 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 HDDC3Q8N4P3 179 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 C10orf53Q8N6V4 93 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 DNAAF1Q8NEP3 725 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 OR2T34Q8NGX1 318 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 CEP76Q8TAP6 659 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 C2CD4CQ8TF44 421 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 GRK7Q8WTQ7 553 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 RLN3Q8WXF3 142 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 KRT35Q92764 455 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 P3H4Q92791 437 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 MMABQ96EY8 250 aaPredicted RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 SIGLEC10Q96LC7 697 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 HS6ST2Q96MM7 605 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 OLFM3Q96PB7 478 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 DGAT2Q96PD7 388 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 LRRC37BQ96QE4 947 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 NUDCD1Q96RS6 583 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 PAFAH2Q99487 392 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 FERMT1Q9BQL6 677 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 MGME1Q9BQP7 344 aa5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 NAA11Q9BSU3 229 aaPredicted RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 FRMD8P1Q9BZ68 369 aaPredicted RBP5.42□□□□□ -1.54
NHLRC3-205ENST00000485407 OSBPL8Q9BZF1 889 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms