RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SLC35G6P0C7Q6 338 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 HIST1H2ADP20671 130 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 CCND1P24385 295 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 OLR1P78380 273 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 OR1C1Q15619 314 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 C3AR1Q16581 482 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.1■□□□□ 0.492e-6■□□□□ 8.3
COL27A1-205ENST00000485397 MSS51Q4VC12 460 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 ZNF808Q8N4W9 903 aaPredicted RBP18.1■□□□□ 0.49
COL27A1-205ENST00000485397 AFAP1L2Q8N4X5 818 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 ZNF740Q8NDX6 193 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 ABHD11Q8NFV4 315 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 HIST1H2AHQ96KK5 128 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 LPAR4Q99677 370 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 HIST1H2AJQ99878 128 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 UTP23Q9BRU9 249 aaKnown RBP18.1■□□□□ 0.49
COL27A1-205ENST00000485397 H2AFJQ9BTM1 129 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 ABCA12Q86UK0 2595 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 NDUFS4O43181 175 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 OR1F1O43749 312 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 SLC19A2O60779 497 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 TSPAN12O95859 305 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 CCR8P51685 355 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 OR4D2P58180 307 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 USP10Q14694 798 aaKnown RBP18.09■□□□□ 0.49
COL27A1-205ENST00000485397 DUPD1Q68J44 220 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 IGDCC3Q8IVU1 814 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 OR4K1Q8NGD4 311 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 OR56A3Q8NH54 315 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 GRK7Q8WTQ7 553 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 SCMH1Q96GD3 660 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 SNF8Q96H20 258 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 OR4K3Q96R72 315 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 OR1F2PQ96R84 312 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 NAP1L3Q99457 506 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-205ENST00000485397 HAUS8Q9BT25 410 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 FAM129AQ9BZQ8 928 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 TSPAN10Q9H1Z9 355 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-205ENST00000485397 SPNS1Q9H2V7 528 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 ARL15Q9NXU5 204 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 PCDHGB6Q9Y5F9 930 aa18.09■□□□□ 0.49
COL27A1-205ENST00000485397 GABRR3A8MPY1 467 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 MAGEB17A8MXT2 336 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 CHST10O43529 356 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 GALR3O60755 368 aaPredicted RBP18.08■□□□□ 0.48
COL27A1-205ENST00000485397 SERPIND1P05546 499 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 FHP07954 510 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 SNRPB2P08579 225 aaKnown RBP18.08■□□□□ 0.48
COL27A1-205ENST00000485397 ALOX12P18054 663 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 IL10P22301 178 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 HTR1EP28566 365 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 FNTAP49354 379 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 SLC26A5P58743 744 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 ADORA2A-AS1P86434 159 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 OC90Q02509 493 aaPredicted RBP18.08■□□□□ 0.48
COL27A1-205ENST00000485397 HERC3Q15034 1050 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 PPP1R7Q15435 360 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 DEFB134Q4QY38 66 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 SPANXN3Q5MJ09 141 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 CATSPEREQ5SY80 951 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 MTFR2Q6P444 385 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 BNC2Q6ZN30 1099 aaPredicted RBP18.08■□□□□ 0.48
COL27A1-205ENST00000485397 CNTN4Q8IWV2 1026 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 TBC1D20Q96BZ9 403 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 GPR137Q96N19 417 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 SARGQ9BW04 601 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 CDCP1Q9H5V8 836 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 RUBCNLQ9H714 662 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 TINAGQ9UJW2 476 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 IKZF3Q9UKT9 509 aa18.08■□□□□ 0.48
COL27A1-205ENST00000485397 NPIPA5E9PKD4 350 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 DNALI1O14645 258 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-205ENST00000485397 NRDCO43847 1150 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 B4GALT2O60909 372 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 TTC4O95801 387 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 GUCA1CO95843 209 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 CD46P15529 392 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 EEF1DP29692 281 aaKnown RBP18.07■□□□□ 0.48
COL27A1-205ENST00000485397 CASP6P55212 293 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 IL2P60568 153 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 ALDH6A1Q02252 535 aaKnown RBP18.07■□□□□ 0.48
COL27A1-205ENST00000485397 PDAP1Q13442 181 aaKnown RBP18.07■□□□□ 0.48
COL27A1-205ENST00000485397 ZNF630Q2M218 657 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-205ENST00000485397 HECTD2Q5U5R9 776 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 ZNF468Q5VIY5 522 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-205ENST00000485397 RPTNQ6XPR3 784 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 GALNTL5Q7Z4T8 443 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 KIF2BQ8N4N8 673 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 SLC5A8Q8N695 610 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 GPATCH11Q8N954 259 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 ACTRT1Q8TDG2 376 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 THAP3Q8WTV1 239 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-205ENST00000485397 CERS2Q96G23 380 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 OSBPL9Q96SU4 736 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 PLAC1Q9HBJ0 212 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 ASIC3Q9UHC3 531 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 NPIPA1Q9UND3 350 aa18.07■□□□□ 0.48
COL27A1-205ENST00000485397 TRBC2A0A5B9 178 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 CTAGE15A4D2H0 777 aa18.06■□□□□ 0.48
COL27A1-205ENST00000485397 ASPDHA6ND91 283 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms