RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 K7EQG2 157 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 OGTO15294 1046 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 RENP00797 406 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 TCF4P15884 667 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 C4BPBP20851 252 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 GPR183P32249 361 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 PPP5CP53041 499 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 MTCP1P56278 107 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 ABCE1P61221 599 aaKnown RBP2.43□□□□□ -2.02
VPS50-216ENST00000484954 NDPQ00604 133 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 CACNG1Q06432 222 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 C3AR1Q16581 482 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 ARMC4Q5T2S8 1044 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 C9orf66Q5T8R8 295 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 WDR78Q5VTH9 848 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 LEMD1Q68G75 181 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 GPR139Q6DWJ6 353 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 TTC27Q6P3X3 843 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 CFAP161Q6P656 301 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 CARM1Q86X55 608 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 FAM219AQ8IW50 185 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 SLC34A3Q8N130 599 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 CD177Q8N6Q3 437 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 PI4KAP1Q8N8J0 262 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 POMGNT2Q8NAT1 580 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 CSNK1G2-AS1Q8NCQ2 148 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 OR9Q2Q8NGE9 314 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 CASP10Q92851 521 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 TAAR6Q96RI8 345 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 OCR1Q9BZK8 76 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 ANKRD2Q9GZV1 360 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 KLK11Q9UBX7 282 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 IL36AQ9UHA7 158 aa2.43□□□□□ -2.02
VPS50-216ENST00000484954 NPHP3Q7Z494 1330 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 IGHV3-16A0A0C4DH30 117 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 hCG_38984A0A1B0GV85 526 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 RPL37AP8A6NKH3 93 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 A8MVM7 634 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 F8VVB4 439 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 F8VWA3 439 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 SIGLEC5O15389 551 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 RECQL5O94762 991 aaPredicted RBP2.42□□□□□ -2.02
VPS50-216ENST00000484954 VENTXO95231 258 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 AKR1B1P15121 316 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 KLK2P20151 261 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 IL11P20809 199 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 EEF1B2P24534 225 aaKnown RBP2.42□□□□□ -2.02
VPS50-216ENST00000484954 CAPZA2P47755 286 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 MZT1Q08AG7 82 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 FGD3Q5JSP0 725 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 SPANXN4Q5MJ08 99 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 FAM182AQ5T1J6 154 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 CATSPER3Q86XQ3 398 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 ZC3H3Q8IXZ2 948 aaKnown RBP2.42□□□□□ -2.02
VPS50-216ENST00000484954 DND1Q8IYX4 353 aaKnown RBP2.42□□□□□ -2.02
VPS50-216ENST00000484954 GPD1LQ8N335 351 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 C4orf32Q8N8J7 132 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 CCDC63Q8NA47 563 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 RHOXF1Q8NHV9 184 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 SEPT1Q8WYJ6 367 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 PGAP3Q96FM1 320 aaPredicted RBP2.42□□□□□ -2.02
VPS50-216ENST00000484954 PGM2Q96G03 612 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 GDAP1L1Q96MZ0 367 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 FAM129AQ9BZQ8 928 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 ST6GALNAC4Q9H4F1 302 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 RNF121Q9H920 327 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 PKD2L2Q9NZM6 624 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 POLKQ9UBT6 870 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 CELA1Q9UNI1 258 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 VSIG4Q9Y279 399 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 IL16Q14005 1332 aa2.42□□□□□ -2.02
VPS50-216ENST00000484954 A8MU76 341 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 RNF103O00237 685 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 PDHXO00330 501 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 MLNRO43193 412 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 PRAF2O60831 178 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 YES1P07947 543 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 LMO2P25791 158 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 PKLRP30613 574 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 HSD17B3P37058 310 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 RAB28P51157 221 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 CLDN17P56750 224 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 ERVK-16P61578 105 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 MLF2Q15773 248 aaPredicted RBP2.41□□□□□ -2.02
VPS50-216ENST00000484954 RBBP7Q16576 425 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 TAZQ16635 292 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 AGAP7PQ5VUJ5 663 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 RNLSQ5VYX0 342 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 FAM166AQ6J272 317 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 MOXD1Q6UVY6 613 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 PRSS55Q6UWB4 352 aaPredicted RBP2.41□□□□□ -2.02
VPS50-216ENST00000484954 DHRS11Q6UWP2 260 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 PRPF39Q86UA1 669 aaKnown RBP2.41□□□□□ -2.02
VPS50-216ENST00000484954 C11orf42Q8N5U0 333 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 KCTD6Q8NC69 237 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 OR5M9Q8NGP3 310 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 NABP1Q96AH0 204 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 HDAC11Q96DB2 347 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 KATNB1Q9BVA0 655 aa2.41□□□□□ -2.02
VPS50-216ENST00000484954 RAB9BQ9NP90 201 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms