RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ECHS1P30084 290 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 PHBP35232 272 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 KCNC1P48547 511 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 KCNC4Q03721 635 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 CDC16Q13042 620 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 SLBPQ14493 270 aaKnown RBP eCLIP11.62□□□□□ -0.55
MSH5-216ENST00000484309 DEFB134Q4QY38 66 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 SLC6A19Q695T7 634 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 JMJD6Q6NYC1 403 aaPredicted RBP11.62□□□□□ -0.55
MSH5-216ENST00000484309 LANCL3Q6ZV70 420 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 TBC1D1Q86TI0 1168 aaPredicted RBP11.62□□□□□ -0.55
MSH5-216ENST00000484309 SNX31Q8N9S9 440 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 OR51Q1Q8NH59 317 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 KCTD4Q8WVF5 259 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 PEX11GQ96HA9 241 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 UBXN10Q96LJ8 280 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 FMO2Q99518 471 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 AIF1LQ9BQI0 150 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 CLMPQ9H6B4 373 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 IGSF5Q9NSI5 407 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 DNAJC11Q9NVH1 559 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 ZFP69BQ9UJL9 534 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 ASB1Q9Y576 335 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 PCDHGB7Q9Y5F8 929 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 UBR5O95071 2799 aaPredicted RBP11.62□□□□□ -0.55
MSH5-216ENST00000484309 NSG1A0A0A6YYJ2 146 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 IGHV3-20A0A0C4DH32 117 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 HMX2A2RU54 273 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 SUPT3HB4E1H0 165 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 C4orf51C9J302 202 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 UBXN8O00124 270 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 CCNT2O60583 730 aaKnown RBP11.61□□□□□ -0.55
MSH5-216ENST00000484309 SUPT3HO75486 399 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 HPP00738 406 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 ALPPP05187 535 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 LTA4HP09960 611 aaKnown RBP11.61□□□□□ -0.55
MSH5-216ENST00000484309 GNAZP19086 355 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 GLRBP48167 497 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 CSRP3P50461 194 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 RAB8AP61006 207 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 FOXK1P85037 733 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 RGS1Q08116 209 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 TOR1AIP1Q5JTV8 583 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 IRAK1BP1Q5VVH5 260 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 ATG9BQ674R7 924 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 SLCO4C1Q6ZQN7 724 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.61□□□□□ -0.55
MSH5-216ENST00000484309 KLHDC8AQ8IYD2 350 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 Q8NA96 180 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 NT5CQ8TCD5 201 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 CCT6BQ92526 530 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 KIAA1191Q96A73 305 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 NACC2Q96BF6 587 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 NXNL1Q96CM4 212 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 VPS50Q96JG6 964 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 CYTH2Q99418 400 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 SARGQ9BW04 601 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 TGIF2Q9GZN2 237 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 VN1R1Q9GZP7 353 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 AICDAQ9GZX7 198 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 KLHL31Q9H511 634 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 ACSS3Q9H6R3 686 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 SNX15Q9NRS6 342 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 C5AR2Q9P296 337 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 MAP10Q9P2G4 905 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 CSAG2Q9Y5P2 127 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 SLC22A7Q9Y694 548 aa11.61□□□□□ -0.55
MSH5-216ENST00000484309 SVILO95425 2214 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 FLNCQ14315 2725 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 PRRC2CQ9Y520 2896 aaKnown RBP11.6□□□□□ -0.55
MSH5-216ENST00000484309 DOPEY2Q9Y3R5 2298 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 IGHV1-45A0A0A0MS14 117 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 A0A0G2JN53 185 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 CLGNO14967 610 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 GALR3O60755 368 aaPredicted RBP11.6□□□□□ -0.55
MSH5-216ENST00000484309 PRAMEF4O60810 478 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 STK16O75716 305 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 SORBS2O94875 1100 aaKnown RBP11.6□□□□□ -0.55
MSH5-216ENST00000484309 TUBB4AP04350 444 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 C2P06681 752 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 RHOXF2BP0C7M4 288 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 C8orf89P0DMQ9 161 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 C1GALT1C1LP0DN25 315 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 ALOX12P18054 663 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 CRABP2P29373 138 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 AHRP35869 848 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 AGTR2P50052 363 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 SOX8P57073 446 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 HYAL2Q12891 473 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 PWP1Q13610 501 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 HERC3Q15034 1050 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 PCOLCEQ15113 449 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 PRAMEF9Q5VWM5 478 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 SULT1C3Q6IMI6 304 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 ADNP2Q6IQ32 1131 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 LINC00696Q6ZRV3 163 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 NDUFAF7Q7L592 441 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 ISCA2Q86U28 154 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 CENPLQ8N0S6 344 aaPredicted RBP11.6□□□□□ -0.55
MSH5-216ENST00000484309 TCAIMQ8N3R3 496 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms