RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SLC5A8Q8N695 610 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 RNF214Q8ND24 703 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 C16orf52Q8NHV5 167 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 ZCCHC10Q8TBK6 192 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 HES6Q96HZ4 224 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 LPAR4Q99677 370 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 KIFC1Q9BW19 673 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 CCM2LQ9NUG4 571 aaPredicted RBP12.07□□□□□ -0.48
UBR4-213ENST00000483922 SYBUQ9NX95 663 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 COQ3Q9NZJ6 369 aa12.07□□□□□ -0.48
UBR4-213ENST00000483922 PDE9AO76083 593 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 ESR1P03372 595 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 CATP04040 527 aaKnown RBP12.06□□□□□ -0.48
UBR4-213ENST00000483922 TPOP07202 933 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 CYLC1P35663 651 aaPredicted RBP12.06□□□□□ -0.48
UBR4-213ENST00000483922 HSD17B2P37059 387 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 MEOX1P50221 254 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 NUP107P57740 925 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 OR4D2P58180 307 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 OLR1P78380 273 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 RPS6KA1Q15418 735 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 SIX1Q15475 284 aaPredicted RBP12.06□□□□□ -0.48
UBR4-213ENST00000483922 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
UBR4-213ENST00000483922 PEX26Q7Z412 305 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 MDGA2Q7Z553 956 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 ARMC10Q8N2F6 343 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 AFAP1L2Q8N4X5 818 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 PRELID2Q8N945 189 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 CALR3Q96L12 384 aaKnown RBP12.06□□□□□ -0.48
UBR4-213ENST00000483922 FOXC2Q99958 501 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 DLL4Q9NR61 685 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 DEPPQ9NTK1 212 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 ZNF358Q9NW07 568 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 ADAMTS6Q9UKP5 1117 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 ZNF148Q9UQR1 794 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 ABCA2Q9BZC7 2435 aa12.06□□□□□ -0.48
UBR4-213ENST00000483922 INTS1Q8N201 2190 aaKnown RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 A0A1B0GTL3 188 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 FAM221AA4D161 298 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 PINLYPA6NC86 204 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 PEX1O43933 1283 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 AVILO75366 819 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 CCNDBP1O95273 360 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 SYF2O95926 243 aaKnown RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 KLK2P20151 261 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 CHRNB4P30926 498 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 NPY2RP49146 381 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 CYB561P49447 251 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 HLCSP50747 726 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 RPS15AP62244 130 aaKnown RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 TIAL1Q01085 375 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBR4-213ENST00000483922 PMPCAQ10713 525 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 LIX1LQ8IVB5 337 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 HORMAD2Q8N7B1 307 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 FAM98AQ8NCA5 519 aaKnown RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 SLC13A3Q8WWT9 602 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 ASB5Q8WWX0 329 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 ZNF559Q9BR84 538 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 FAM114A2Q9NRY5 505 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 UTP6Q9NYH9 597 aaKnown RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 KCNN3Q9UGI6 736 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 ZNF223Q9UK11 482 aaPredicted RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 RPH3AQ9Y2J0 694 aaPredicted RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 SLC22A7Q9Y694 548 aa12.05□□□□□ -0.48
UBR4-213ENST00000483922 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
UBR4-213ENST00000483922 MIF4GDA9UHW6 222 aaKnown RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 CHST10O43529 356 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 KLK8O60259 260 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 KIF5CO60282 957 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 FHP07954 510 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 NPPBP16860 134 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 GPR85P60893 370 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 MPP1Q00013 466 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 SNTB1Q13884 538 aaKnown RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 THEMIS2Q5TEJ8 643 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 RTL6Q6ICC9 239 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 CAPN13Q6MZZ7 669 aaPredicted RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 MRNIPQ6NTE8 343 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 MBOAT1Q6ZNC8 495 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 C16orf47Q6ZP98 133 aaPredicted RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 PIWIL4Q7Z3Z4 852 aaKnown RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 SDCCAG8Q86SQ7 713 aaPredicted RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 ASPGQ86U10 573 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 TMEM200AQ86VY9 491 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 CILP2Q8IUL8 1156 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 DENND6AQ8IWF6 608 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 UBL4BQ8N7F7 174 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 ZFP62Q8NB50 900 aaPredicted RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 ZNF740Q8NDX6 193 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 MCOLN3Q8TDD5 553 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 SEC16BQ96JE7 1060 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 TCF12Q99081 682 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 EBNA1BP2Q99848 306 aaKnown RBP12.04□□□□□ -0.48
UBR4-213ENST00000483922 IL22Q9GZX6 179 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 DEFB127Q9H1M4 99 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 ANKHQ9HCJ1 492 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 KCNJ16Q9NPI9 418 aa12.04□□□□□ -0.48
UBR4-213ENST00000483922 NECTIN3Q9NQS3 549 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms