RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, human

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-206	ENST00000482771	ELP5	Q8TE02	316 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	SLC13A3	Q8WWT9	602 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	ASB5	Q8WWX0	329 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	TM4SF19	Q96DZ7	209 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	THAP11	Q96EK4	314 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	HES6	Q96HZ4	224 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	PANX2	Q96RD6	677 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	RBCK1	Q9BYM8	510 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	RBSN	Q9H1K0	784 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	KCNJ16	Q9NPI9	418 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	LANCL2	Q9NS86	450 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	NAALAD2	Q9Y3Q0	740 aa		12.03	□□□□□ -0.48
TMEM54-206	ENST00000482771	DNAJC13	O75165	2243 aa		12.02	□□□□□ -0.48
TMEM54-206	ENST00000482771	ZNF860	A6NHJ4	632 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	FAM90A27P	A6NNH2	459 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	USP27X	A6NNY8	438 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	FOXO6	A8MYZ6	492 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	GFY	I3L273	518 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	CDK2AP1	O14519	115 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	KIF5C	O60282	957 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	CDC40	O60508	579 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	DNAJB6	O75190	326 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	PDE9A	O76083	593 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	TOX	O94900	526 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	IGFBP2	P18065	325 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	IL10	P22301	178 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	COIL	P38432	576 aa	Predicted RBP	12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	RFC3	P40938	356 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	MLF1	P58340	268 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	CUL1	Q13616	776 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	TTLL9	Q3SXZ7	439 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	NEPRO	Q6NW34	567 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	CENPU	Q71F23	418 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	ASPG	Q86U10	573 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	CD163	Q86VB7	1156 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	SULF2	Q8IWU5	870 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	OR5T3	Q8NGG3	340 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	NRGN	Q92686	78 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	TMEM125	Q96AQ2	219 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	ZNF559	Q9BR84	538 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	TMUB1	Q9BVT8	246 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	SYBU	Q9NX95	663 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	RNF6	Q9Y252	685 aa		12.02	□□□□□ -0.49
TMEM54-206	ENST00000482771	KLRC4-KLRK1	H3BQV0	150 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	AP3B1	O00203	1094 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	TFEC	O14948	347 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	PEX1	O43933	1283 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	HS6ST1	O60243	411 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	PRMT3	O60678	531 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	B4GALT2	O60909	372 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	F7	P08709	466 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	MPC1L	P0DKB6	136 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	HOXB4	P17483	251 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	IMPA1	P29218	277 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	CHRNB4	P30926	498 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	DNAJA1	P31689	397 aa	Known RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	SKIV2L2	P42285	1042 aa	Known RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	MEOX1	P50221	254 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	HLCS	P50747	726 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	ITGA8	P53708	1063 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	IST1	P53990	364 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	BASP1	P80723	227 aa	Known RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	MPP1	Q00013	466 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	PMPCA	Q10713	525 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	RPS6KA1	Q15418	735 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	CES4A	Q5XG92	561 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	TMEM200A	Q86VY9	491 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	CILP2	Q8IUL8	1156 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	CCDC71	Q8IV32	467 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	POGLUT1	Q8NBL1	392 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	RND1	Q92730	232 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	ALKBH8	Q96BT7	664 aa	Known RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	TBC1D20	Q96BZ9	403 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	PTCHD1	Q96NR3	888 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	OR1F2P	Q96R84	312 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	EIF2B3	Q9NR50	452 aa	Known RBP	12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	SOX13	Q9UN79	622 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	SLC22A7	Q9Y694	548 aa		12.01	□□□□□ -0.49
TMEM54-206	ENST00000482771	CTAGE9	A4FU28	777 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	CHST10	O43529	356 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	FH	P07954	510 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	HOXD4	P09016	255 aa	Predicted RBP	12	□□□□□ -0.49
TMEM54-206	ENST00000482771	TFEB	P19484	476 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	OGN	P20774	298 aa	Known RBP	12	□□□□□ -0.49
TMEM54-206	ENST00000482771	TRHR	P34981	398 aa	Predicted RBP	12	□□□□□ -0.49
TMEM54-206	ENST00000482771	BTG2	P78543	158 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	TFF3	Q07654	80 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	KIF5A	Q12840	1032 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	CMPK2	Q5EBM0	449 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	SEL1L2	Q5TEA6	688 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	UBE2R2	Q712K3	238 aa	Predicted RBP	12	□□□□□ -0.49
TMEM54-206	ENST00000482771	GIMAP7	Q8NHV1	300 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	DEFB126	Q9BYW3	111 aa		12	□□□□□ -0.49
TMEM54-206	ENST00000482771	TSGA10	Q9BZW7	698 aa		12	□□□□□ -0.49

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