RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 GRHL3Q8TE85 626 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 SSC4DQ8WTU2 575 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 PYROXD1Q8WU10 500 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 ATL1Q8WXF7 558 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 PSMF1Q92530 271 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 EXT2Q93063 718 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 TSLPQ969D9 159 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 TM4SF19Q96DZ7 209 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 THAP11Q96EK4 314 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 PSMG3-AS1Q96PY0 264 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 ZNF700Q9H0M5 742 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 RHOJQ9H4E5 214 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 GRHL1Q9NZI5 618 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 RNF14Q9UBS8 474 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 CTNNAL1Q9UBT7 734 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 SLC22A14Q9Y267 594 aa9.89□□□□□ -0.83
CPSF4-212ENST00000482251 MTO1Q9Y2Z2 717 aaKnown RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 RP1L1Q8IWN7 2480 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-212ENST00000482251 LOC102723996A0A087X1L8 192 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 A0A1W2PQ72 361 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 TCRBV9S1A1TA0A576 114 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 DYTNA2CJ06 578 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 FAM187AA6NFU0 413 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 C4orf51C9J302 202 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 E2F3O00716 465 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 WDR47O94967 919 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 CBX6O95503 412 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 GP1BBP13224 206 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 GDF5P43026 501 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 TSFMP43897 325 aaKnown RBP9.88□□□□□ -0.83
CPSF4-212ENST00000482251 SCTRP47872 440 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 RAB8AP61006 207 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 ZNF33BQ06732 778 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 RGS1Q08116 209 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 ABRAXAS2Q15018 415 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 EFTUD2Q15029 972 aaKnown RBP eCLIP9.88□□□□□ -0.832e-6■■■□□ 16.7
CPSF4-212ENST00000482251 RBBP5Q15291 538 aaKnown RBP9.88□□□□□ -0.83
CPSF4-212ENST00000482251 FAM180AQ6UWF9 173 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 CPEB2Q7Z5Q1 589 aaKnown RBP9.88□□□□□ -0.83
CPSF4-212ENST00000482251 ANKRD37Q7Z713 158 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 ADAMTSL2Q86TH1 951 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPSF4-212ENST00000482251 NKAPQ8N5F7 415 aaKnown RBP9.88□□□□□ -0.83
CPSF4-212ENST00000482251 TBC1D19Q8N5T2 526 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 ANKRD53Q8N9V6 530 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 BBOF1Q8ND07 529 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 ERP44Q9BS26 406 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPSF4-212ENST00000482251 AGPAT4Q9NRZ5 378 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 NSMCE4AQ9NXX6 385 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 WHRNQ9P202 907 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 TXNDC16Q9P2K2 825 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 ERRFI1Q9UJM3 462 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-212ENST00000482251 OARD1Q9Y530 152 aa9.88□□□□□ -0.83
CPSF4-212ENST00000482251 PRRC2CQ9Y520 2896 aaKnown RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 SPTAN1Q13813 2472 aaKnown RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 A0A0G2JN53 185 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 A8MUI8 341 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 NDC80O14777 642 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 GALR3O60755 368 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 B4GALT2O60909 372 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 FAM155BO75949 473 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 WDPCPO95876 746 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 ALOX12P18054 663 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 PLTPP55058 493 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 USP10Q14694 798 aaKnown RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 SLMAPQ14BN4 828 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 HERC3Q15034 1050 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 TRADDQ15628 312 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 SFT2D3Q587I9 215 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 TOR1AIP1Q5JTV8 583 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 ABHD17BQ5VST6 288 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 PAPD4Q6PIY7 484 aaKnown RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 NXPE4Q6UWF7 544 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 RIPOR1Q6ZS17 1223 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 OR4K1Q8NGD4 311 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 CCT6BQ92526 530 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 CDKL2Q92772 493 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 ESAMQ96AP7 390 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 PDLIM5Q96HC4 596 aaKnown RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 IMMP1LQ96LU5 166 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 LMF1Q96S06 567 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 CYTH2Q99418 400 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 RBBP8Q99708 897 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 AIF1LQ9BQI0 150 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 TMEM79Q9BSE2 394 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 MCMBPQ9BTE3 642 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 TUBB6Q9BUF5 446 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 RHBGQ9H310 441 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 PELI2Q9HAT8 420 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 LANCL2Q9NS86 450 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 ANKRD10Q9NXR5 420 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 WWOXQ9NZC7 414 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 PLEKHB1Q9UF11 243 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 C19orf25Q9UFG5 118 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 ZFP69BQ9UJL9 534 aa9.87□□□□□ -0.83
CPSF4-212ENST00000482251 UTP11Q9Y3A2 253 aaKnown RBP9.87□□□□□ -0.83
CPSF4-212ENST00000482251 SLC22A7Q9Y694 548 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms