RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 BAHCC1Q9P281 2608 aa11.25□□□□□ -0.61
HMGN1-213ENST00000482192 GCN1Q92616 2671 aaKnown RBP11.24□□□□□ -0.61
HMGN1-213ENST00000482192 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 IGHV1-45A0A0A0MS14 117 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 URADA6NGE7 173 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 GALR3O60755 368 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-213ENST00000482192 H2AFYO75367 372 aaKnown RBP11.24□□□□□ -0.61
HMGN1-213ENST00000482192 RDH16O75452 317 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 C8orf89P0DMQ9 161 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 C1GALT1C1LP0DN25 315 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 ALOX12P18054 663 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 IL10P22301 178 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
HMGN1-213ENST00000482192 GSTM2P28161 218 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 CD97P48960 835 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 EEF1A2Q05639 463 aaKnown RBP11.24□□□□□ -0.61
HMGN1-213ENST00000482192 Q0VFX4 171 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 RBBP5Q15291 538 aaKnown RBP11.24□□□□□ -0.61
HMGN1-213ENST00000482192 IGFBP7Q16270 282 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 DEFB134Q4QY38 66 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 MFSD4BQ5TF39 518 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 FAAH2Q6GMR7 532 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 TMEM205Q6UW68 189 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 SLCO4C1Q6ZQN7 724 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 ZADH2Q8N4Q0 377 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 ANKRD53Q8N9V6 530 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 PDPRQ8NCN5 879 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 STAG3L4Q8TBR4 150 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 CPT1CQ8TCG5 803 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 IFT81Q8WYA0 676 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 MIB2Q96AX9 1013 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 OR1F2PQ96R84 312 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 FMO2Q99518 471 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 TMEM79Q9BSE2 394 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 VN1R1Q9GZP7 353 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 EHD1Q9H4M9 534 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 ACSS3Q9H6R3 686 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 DNAJC11Q9NVH1 559 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 CD274Q9NZQ7 290 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 PLAAQ9Y263 795 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 ACOT9Q9Y305 439 aa11.24□□□□□ -0.61
HMGN1-213ENST00000482192 NUP210LQ5VU65 1888 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 SPTA1P02549 2419 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 A0A087X1B8 175 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ZNF860A6NHJ4 632 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 CLGNO14967 610 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 TAPBPO15533 448 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 KERAO60938 352 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 JRKO75564 520 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 STK16O75716 305 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ZIC2O95409 532 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 SERPINA7P05543 415 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 SERPINA6P08185 405 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 LTA4HP09960 611 aaKnown RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ZNF888P0CJ79 500 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 TFEBP19484 476 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 HSPA7P48741 367 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 AP2B1P63010 937 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 BMPR2Q13873 1038 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 SLBPQ14493 270 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 UAP1Q16222 522 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 PDK4Q16654 411 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 MROH9Q5TGP6 573 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 TMIGD1Q6UXZ0 262 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ISCA2Q86U28 154 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 KRT78Q8N1N4 520 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 CEP112Q8N8E3 955 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 SNX31Q8N9S9 440 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 Q8NA96 180 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 TTLQ8NG68 377 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 UTP15Q8TED0 518 aaKnown RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 EXT2Q93063 718 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 MRRFQ96E11 262 aaKnown RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 SEC16BQ96JE7 1060 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 SLC6A16Q9GZN6 736 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 PITHD1Q9GZP4 211 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ILKAPQ9H0C8 392 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ZNF700Q9H0M5 742 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 CDC42EP4Q9H3Q1 356 aaKnown RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 EPS8L2Q9H6S3 715 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ALG9Q9H6U8 611 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 CLK4Q9HAZ1 481 aaKnown RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 ZBTB20Q9HC78 741 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 IGSF5Q9NSI5 407 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 NUDT4Q9NZJ9 180 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 LUZP4Q9P127 313 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 COPG2Q9UBF2 871 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 C19orf25Q9UFG5 118 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 PTBP2Q9UKA9 531 aaKnown RBP11.23□□□□□ -0.61
HMGN1-213ENST00000482192 BOD1L1Q8NFC6 3051 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 PCM1Q15154 2024 aa11.23□□□□□ -0.61
HMGN1-213ENST00000482192 CCDC189A1A4V9 331 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 HMX2A2RU54 273 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 SYCE1LA8MT33 242 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 SUPT3HB4E1H0 165 aa11.22□□□□□ -0.61
HMGN1-213ENST00000482192 VPS4BO75351 444 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms