RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 OTCP00480 354 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 SERPINE1P05121 402 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 C1GALT1C1LP0DN25 315 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 THRAP10827 490 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 GRK2P25098 689 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 PRKAR1BP31321 381 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CCR10P46092 362 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 ARL4DP49703 201 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CCR8P51685 355 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 MEF2AQ02078 507 aaPredicted RBP11.11□□□□□ -0.63
HPS4-212ENST00000481910 LCP2Q13094 533 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 TOMM20Q15388 145 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 PHF19Q5T6S3 580 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 FIGLAQ6QHK4 219 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 NXPE4Q6UWF7 544 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 RBM44Q6ZP01 1051 aaKnown RBP11.11□□□□□ -0.63
HPS4-212ENST00000481910 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 MILR1Q7Z6M3 343 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CARFQ8N187 725 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 DCBLD1Q8N8Z6 715 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 RCBTB1Q8NDN9 531 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 ABHD11Q8NFV4 315 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 MED30Q96HR3 178 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CDK15Q96Q40 435 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 NTMT1Q9BV86 223 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 C12orf10Q9HB07 376 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 MID1IP1Q9NPA3 183 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 SOHLH2Q9NX45 425 aa11.11□□□□□ -0.63
HPS4-212ENST00000481910 CNOT1A5YKK6 2376 aaKnown RBP11.1□□□□□ -0.63
HPS4-212ENST00000481910 LOC105371267A0A1B0GV96 52 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 DCDC2BA2VCK2 349 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 PRAMEF10O60809 474 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 PRAMEF4O60810 478 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 WFS1O76024 890 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 CLDN9O95484 217 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
HPS4-212ENST00000481910 GRK3P35626 688 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 HSD11B2P80365 405 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 STX3Q13277 289 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 DOC2AQ14183 400 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 MAPRE2Q15555 327 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 ARL13AQ5H913 290 aaPredicted RBP11.1□□□□□ -0.63
HPS4-212ENST00000481910 TMTC4Q5T4D3 741 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 PRAMEF9Q5VWM5 478 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 ATG9BQ674R7 924 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 FCRL6Q6DN72 434 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 PRSS42Q7Z5A4 293 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 B3GNT8Q7Z7M8 397 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 SLITRK4Q8IW52 837 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 C19orf47Q8N9M1 422 aaKnown RBP11.1□□□□□ -0.63
HPS4-212ENST00000481910 OR4F6Q8NGB9 312 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 OR6Y1Q8NGX8 325 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 PTCD3Q96EY7 689 aaKnown RBP11.1□□□□□ -0.63
HPS4-212ENST00000481910 TCTN2Q96GX1 697 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 CCDC74BQ96LY2 380 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 TMEM74Q96NL1 305 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 CATSPER2Q96P56 530 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 TRMOQ9BU70 441 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 SHCBP1LQ9BZQ2 653 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 VCXQ9H320 206 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 EHD1Q9H4M9 534 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 PELI2Q9HAT8 420 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 SEMA5BQ9P283 1151 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 STK38LQ9Y2H1 464 aa11.1□□□□□ -0.63
HPS4-212ENST00000481910 FAM32AQ9Y421 112 aaKnown RBP11.1□□□□□ -0.63
HPS4-212ENST00000481910 A0A1B0GTL3 188 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 FEZF1A0PJY2 475 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 AGRPO00253 132 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 UBFD1O14562 309 aaKnown RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 NRP2O60462 931 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 UGDHO60701 494 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 MT-CO3P00414 261 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CHRNGP07510 517 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 EBLN1P0CF75 366 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 PRKACBP22694 351 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CXCR2P25025 360 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 SERPINB5P36952 375 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 SLC1A6P48664 564 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CLDN6P56747 220 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 SH3BP2P78314 561 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CSNK1G2P78368 415 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZFP36L1Q07352 338 aaKnown RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 PCDH1Q08174 1060 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 BST1Q10588 318 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 TRA2AQ13595 282 aaKnown RBP eCLIP11.09□□□□□ -0.63
HPS4-212ENST00000481910 RCN2Q14257 317 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 TBCCQ15814 346 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZIC1Q15915 447 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CEP78Q5JTW2 689 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 LIPJQ5W064 366 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CES4AQ5XG92 561 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ATG16L1Q676U5 607 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZNF425Q6IV72 752 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 GPRIN3Q6ZVF9 776 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 KMT5CQ86Y97 462 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 OR4K1Q8NGD4 311 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 RAB3IL1Q8TBN0 382 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZNF382Q96SR6 550 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 AIF1LQ9BQI0 150 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms