RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.06□□□□□ -0.8
SSBP1-210ENST00000481508 C4orf33Q8N1A6 199 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 AMER3Q8N944 861 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 PROKR1Q8TCW9 393 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 CREB3L4Q8TEY5 395 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 SNRNP27Q8WVK2 155 aaKnown RBP10.06□□□□□ -0.8
SSBP1-210ENST00000481508 RERGQ96A58 199 aaPredicted RBP10.06□□□□□ -0.8
SSBP1-210ENST00000481508 KIAA1143Q96AT1 154 aaPredicted RBP10.06□□□□□ -0.8
SSBP1-210ENST00000481508 PHF21BQ96EK2 531 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 CABS1Q96KC9 395 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 CCDC77Q9BR77 488 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 MESP1Q9BRJ9 268 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 SARGQ9BW04 601 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 KLHL31Q9H511 634 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 TXLNGQ9NUQ3 528 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 CTSFQ9UBX1 484 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 NDOR1Q9UHB4 597 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 PCDHGA6Q9Y5G7 932 aa10.06□□□□□ -0.8
SSBP1-210ENST00000481508 TNRC6AQ8NDV7 1962 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 A0A1B0GTL3 188 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 SYCE1LA8MT33 242 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 C21orf140B9A014 251 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 K7EPI3 171 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 E2F3O00716 465 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 CREG1O75629 220 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 IPO13O94829 963 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ONECUT2O95948 504 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 RBP1P09455 135 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 IL1RNP18510 177 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 EEF1DP29692 281 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 EFNA3P52797 238 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ARSFP54793 590 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ALDH18A1P54886 795 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 UCNP55089 124 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 DCDP81605 110 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 MAT1AQ00266 395 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ZNF844Q08AG5 666 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 CDC20Q12834 499 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 CHIT1Q13231 466 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 E2F2Q14209 437 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ERV3-1Q14264 604 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 RASA2Q15283 850 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 RBBP5Q15291 538 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 PCBP2Q15366 365 aaKnown RBP eCLIP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 XKR6Q5GH73 641 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 LGSNQ5TDP6 509 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 MLIPQ5VWP3 458 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ATG9BQ674R7 924 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 TMEM214Q6NUQ4 689 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 MRPL14Q6P1L8 145 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 SHISA6Q6ZSJ9 500 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 RNF175Q8N4F7 328 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 OR9A4Q8NGU2 314 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 SLC13A3Q8WWT9 602 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 TTC9Q92623 222 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 THAP11Q96EK4 314 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 WDR34Q96EX3 536 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 MRPL57Q9BQC6 102 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 MRPL46Q9H2W6 279 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 CNOT10Q9H9A5 744 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ZBTB26Q9HCK0 441 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 GPRC5BQ9NZH0 403 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 OPTCQ9UBM4 332 aa10.05□□□□□ -0.8
SSBP1-210ENST00000481508 ZNF490Q9ULM2 529 aaPredicted RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 FARSAQ9Y285 508 aaKnown RBP10.05□□□□□ -0.8
SSBP1-210ENST00000481508 SPENQ96T58 3664 aaKnown RBP10.04□□□□□ -0.8
SSBP1-210ENST00000481508 POLQO75417 2590 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 CCDC189A1A4V9 331 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 CDC14CA4D256 554 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 ZNF860A6NHJ4 632 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 ZNF891A8MT65 544 aaPredicted RBP10.04□□□□□ -0.8
SSBP1-210ENST00000481508 MASP2O00187 686 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 PPP6CO00743 305 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 OR7A17O14581 309 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 CLGNO14967 610 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 NDUFS4O43181 175 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 DLX3O60479 287 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 CDH16O75309 829 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 KLF7O75840 302 aaPredicted RBP10.04□□□□□ -0.8
SSBP1-210ENST00000481508 SERPIND1P05546 499 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 UMODP07911 640 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 RPS17P08708 135 aaKnown RBP10.04□□□□□ -0.8
SSBP1-210ENST00000481508 RAB40ALP0C0E4 278 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 CREB1P16220 341 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 KRT15P19012 456 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 TSPAN8P19075 237 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 GNAZP19086 355 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 HNF4AP41235 474 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 MUM1Q2TAK8 710 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 LINC00303Q3SY05 128 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 YOD1Q5VVQ6 348 aaPredicted RBP10.04□□□□□ -0.8
SSBP1-210ENST00000481508 HIST2H2BCQ6DN03 193 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 TRABD2AQ86V40 505 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 CAMKVQ8NCB2 501 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 NT5CQ8TCD5 201 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 ACMSDQ8TDX5 336 aa10.04□□□□□ -0.8
SSBP1-210ENST00000481508 ADAMTS17Q8TE56 1095 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms