RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 VN1R1Q9GZP7 353 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCM2-213ENST00000480658 OLAHQ9NV23 265 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 ASF1BQ9NVP2 202 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 LUZP4Q9P127 313 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 PTGFRNQ9P2B2 879 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 MRPS33Q9Y291 106 aaKnown RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 PCSK5Q92824 1860 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 FEZF1A0PJY2 475 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 OR5H15A6NDH6 313 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 SGK494L7N484 410 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 GALR3O60755 368 aaPredicted RBP10.81□□□□□ -0.68
CCM2-213ENST00000480658 SAT1P21673 171 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 SERPINB1P30740 379 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 SCTRP47872 440 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 ETF1P62495 437 aaKnown RBP10.81□□□□□ -0.68
CCM2-213ENST00000480658 RBPJQ06330 500 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 SRSF1Q07955 248 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCM2-213ENST00000480658 Q0VFX4 171 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 LAPTM5Q13571 262 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 ABRAXAS2Q15018 415 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 PCOLCEQ15113 449 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 TERF2Q15554 542 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 TGFBIQ15582 683 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 MEP1AQ16819 746 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 BTBD16Q32M84 506 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 HP1BP3Q5SSJ5 553 aaPredicted RBP10.81□□□□□ -0.68
CCM2-213ENST00000480658 GRTP1Q5TC63 336 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 MTFR2Q6P444 385 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 NXPE4Q6UWF7 544 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 MBOAT1Q6ZNC8 495 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 QSOX2Q6ZRP7 698 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 TMPRSS11BQ86T26 416 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 LAPTM4BQ86VI4 370 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 KLHDC8AQ8IYD2 350 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 FAM98AQ8NCA5 519 aaKnown RBP10.81□□□□□ -0.68
CCM2-213ENST00000480658 ZNF740Q8NDX6 193 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 PLPP5Q8NEB5 264 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 SRFBP1Q8NEF9 429 aaKnown RBP10.81□□□□□ -0.68
CCM2-213ENST00000480658 DNAJB8Q8NHS0 232 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 ZCCHC10Q8TBK6 192 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 UBE2E3Q969T4 207 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 PYCR2Q96C36 320 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 IMMP1LQ96LU5 166 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 MAGEB10Q96LZ2 347 aaPredicted RBP10.81□□□□□ -0.68
CCM2-213ENST00000480658 NPLQ9BXD5 320 aaPredicted RBP10.81□□□□□ -0.68
CCM2-213ENST00000480658 ROGDIQ9GZN7 287 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 MMP25Q9NPA2 562 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 HCN3Q9P1Z3 774 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 SNX24Q9Y343 169 aa10.81□□□□□ -0.68
CCM2-213ENST00000480658 FLNCQ14315 2725 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 TNRC6AQ8NDV7 1962 aaKnown RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 A0A1B0GUH1 482 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 TCRBV9S1A1TA0A576 114 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 BLACEA4D250 179 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 CLDN4O14493 209 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 CLGNO14967 610 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 RDH16O75452 317 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 WDR47O94967 919 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 RASAL1O95294 804 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 TUBB4AP04350 444 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 SERPIND1P05546 499 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 F7P08709 466 aaPredicted RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 SPTBP11277 2137 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 RNH1P13489 461 aaKnown RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 CRABP2P29373 138 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 PHBP35232 272 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 GGT5P36269 586 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 FOXL2P58012 376 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 TAS2R39P59534 338 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 RAB10P61026 200 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 MAT1AQ00266 395 aaKnown RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 ZNF33BQ06732 778 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 ACTN3Q08043 901 aaPredicted RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 USP10Q14694 798 aaKnown RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 HIST2H2ACQ16777 129 aaPredicted RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 KCTD19Q17RG1 926 aaPredicted RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 PRR30Q53SZ7 412 aaPredicted RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 HIST2H2AA3Q6FI13 130 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 FAAH2Q6GMR7 532 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 SULT1C3Q6IMI6 304 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 TMIGD1Q6UXZ0 262 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 C3orf62Q6ZUJ4 267 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 ANKRD37Q7Z713 158 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 TBC1D1Q86TI0 1168 aaPredicted RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 TMEM178AQ8NBL3 297 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 KCT2Q8NC54 265 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 GRHL3Q8TE85 626 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 GAL3ST3Q96A11 431 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 OR4K3Q96R72 315 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 GPR22Q99680 433 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 RBBP8Q99708 897 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 SLX1AQ9BQ83 275 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 WDR83Q9BRX9 315 aaKnown RBP10.8□□□□□ -0.68
CCM2-213ENST00000480658 MCMBPQ9BTE3 642 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 EFCAB11Q9BUY7 163 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 SLC6A16Q9GZN6 736 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 NT5DC2Q9H857 520 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 PLAC1Q9HBJ0 212 aa10.8□□□□□ -0.68
CCM2-213ENST00000480658 SAYSD1Q9NPB0 183 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms